RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 OAS3Q9Y6K5 1087 aaKnown RBP4.02□□□□□ -1.77
LIG4-201ENST00000356922 PLXNA2O75051 1894 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 CCDC162PA2VCL2 907 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 C1QTNF3-AMACRE9PGA6 284 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 CASC3O15234 703 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 CTIFO43310 598 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 FSBPO95073 299 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 VAPBO95292 243 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 ERVK-10P10266 1014 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HLA-DPA1P20036 260 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 GRIA4P48058 902 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 POLD2P49005 469 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 STC1P52823 247 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 B4GALNT1Q00973 533 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 RPL6Q02878 288 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 SEPT6Q14141 434 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 PRPSAP1Q14558 356 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 CHRNA6Q15825 494 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TMEM52BQ4KMG9 183 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 ANKRD20A4Q4UJ75 823 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 GLE1Q53GS7 698 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 ZNF542PQ5EBM4 170 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 RALGPS1Q5JS13 557 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 FAM46CQ5VWP2 391 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 NAPEPLDQ6IQ20 393 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 FAM151BQ6UXP7 276 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 NAPRTQ6XQN6 538 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 SYDE1Q6ZW31 735 aaPredicted RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 USP30Q70CQ3 517 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 GLT6D1Q7Z4J2 308 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 CLDN19Q8N6F1 224 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TP53I13Q8NBR0 393 aaPredicted RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 HSPA12BQ96MM6 686 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 KIFC1Q9BW19 673 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 SLC17A9Q9BYT1 436 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 SAYSD1Q9NPB0 183 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 MRPL40Q9NQ50 206 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 RXFP3Q9NSD7 469 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 PRDM4Q9UKN5 801 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 PRKAB1Q9Y478 270 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 MAD1L1Q9Y6D9 718 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TMEM202A6NGA9 273 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 SDR42E2A6NKP2 422 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 INPP4BO15327 924 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 SHBGP04278 402 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 FGF1P05230 155 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 ELFN1P0C7U0 828 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HOXA6P31267 233 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 VIPR1P32241 457 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 MAPK8P45983 427 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 BNC1Q01954 994 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 CREB5Q02930 508 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 ZBTB16Q05516 673 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 CTBP1Q13363 440 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HLTFQ14527 1009 aaKnown RBP eCLIP4.01□□□□□ -1.77
LIG4-201ENST00000356922 ACOX1Q15067 660 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HIF1AQ16665 826 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 PLK5Q496M5 336 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 CASC4Q6P4E1 433 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 XKR5Q6UX68 686 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 PPP1R21Q6ZMI0 780 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 PTAR1Q7Z6K3 402 aaPredicted RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 DSG4Q86SJ6 1040 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HOOK3Q86VS8 718 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TMEM145Q8NBT3 493 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 OR2I1PQ8NGU4 316 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HCAR2Q8TDS4 363 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 UBXN4Q92575 508 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 EBNA1BP2Q99848 306 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 GPR63Q9BZJ6 419 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TM7SF3Q9NS93 570 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 GALPQ9UBC7 116 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 GULP1Q9UBP9 304 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 FZD4Q9ULV1 537 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TMEM98Q9Y2Y6 226 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TCAF1Q9Y4C2 921 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 RPS6KL1Q9Y6S9 549 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 ASXL3Q9C0F0 2248 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HMX2A2RU54 273 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 ERI2A8K979 691 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 IQCF5A8MTL0 148 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 METTL12A8MUP2 240 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 MAP3K13O43283 966 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 AP1G1O43747 822 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 SGTAO43765 313 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 GOT2P00505 430 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 GCAP28676 217 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 IGFALSP35858 605 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 MAGEA4P43358 317 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 POLR2LP62875 67 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 IRF4Q15306 451 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 SLC14A2Q15849 920 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HSP90AA5PQ58FG0 334 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 TSTD2Q5T7W7 516 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HENMT1Q5T8I9 393 aaKnown RBP4.01□□□□□ -1.77
LIG4-201ENST00000356922 TCEAL6Q6IPX3 200 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 GCNT7Q6ZNI0 430 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 CENPUQ71F23 418 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 HORMAD1Q86X24 394 aa4.01□□□□□ -1.77
LIG4-201ENST00000356922 OR2W6PQ8NHA6 318 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms