RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TSPAN33Q86UF1 283 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 LUZP1Q86V48 1076 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 PELI3Q8N2H9 469 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 CBARPQ8N350 705 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-204ENST00000356316 TEX26Q8N6G2 289 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 ZSCAN1Q8NBB4 408 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 FRMD8Q9BZ67 464 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-204ENST00000356316 CDH19Q9H159 772 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 CBX8Q9HC52 389 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 RBM22Q9NW64 420 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN3-204ENST00000356316 TAAR2Q9P1P5 351 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 CTTNBP2NLQ9P2B4 639 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 AMACRQ9UHK6 382 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 CD84Q9UIB8 345 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 LCMT1Q9UIC8 334 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 DNPEPQ9ULA0 475 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 PPIL1Q9Y3C6 166 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 UNC13CQ8NB66 2214 aa10.63□□□□□ -0.71
CAPN3-204ENST00000356316 FASNP49327 2511 aaKnown RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 MATN3O15232 486 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 B4GAT1O43505 415 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ASMTLO95671 621 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 IVLP07476 585 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 PDHA1P08559 390 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 KRT7P08729 469 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 H2AFZP0C0S5 128 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 LIPCP11150 499 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ZNF30P17039 623 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 MX2P20592 715 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 LHCGRP22888 699 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 IL4RP24394 825 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 AK4P27144 223 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 GJC1P36383 396 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ADCY8P40145 1251 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 GARSP41250 739 aaKnown RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 B4GALNT1Q00973 533 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 CTBSQ01459 385 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 SLC25A11Q02978 314 aaKnown RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 GALNT2Q10471 571 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 LY6DQ14210 128 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 PAFAH1B3Q15102 231 aaKnown RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ANKRD20A8PQ5CZ79 823 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 MANEAQ5SRI9 462 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 KIAA1614Q5VZ46 1190 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 LRRC66Q68CR7 880 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 H2AFVQ71UI9 128 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 TECPR1Q7Z6L1 1165 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 NLRP8Q86W28 1048 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 GALNT13Q8IUC8 556 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 SFTPA2Q8IWL1 248 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 NRSN1Q8IZ57 195 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 CCNYQ8ND76 341 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 CCDC112Q8NEF3 446 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 EXD1Q8NHP7 514 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ZNF564Q8TBZ8 553 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 PIH1D2Q8WWB5 315 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 CTNNBL1Q8WYA6 563 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 USP7Q93009 1102 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 AHCYL2Q96HN2 611 aaKnown RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 MCCC1Q96RQ3 725 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ARHGAP9Q9BRR9 750 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ZMYND15Q9H091 742 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ABCG8Q9H221 673 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 SEMA6CQ9H3T2 930 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 RDH14Q9HBH5 336 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ZNHIT2Q9UHR6 403 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 ACSL6Q9UKU0 697 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 SLC17A4Q9Y2C5 497 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 TMEM98Q9Y2Y6 226 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.62□□□□□ -0.71
CAPN3-204ENST00000356316 PTPRQQ9UMZ3 2332 aa10.62□□□□□ -0.71
CAPN3-204ENST00000356316 PRAMEF33A0A0G2JMD5 474 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 A0A0J9YYE9 177 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 PRAMEF10O60809 474 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 TRBC1P01850 177 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 FUCA1P04066 466 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 CD48P09326 243 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 NUDT7P0C024 238 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ITIH1P19827 911 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 CD82P27701 267 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ACTR1BP42025 376 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 MAZP56270 477 aaKnown RBP10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ACTR1AP61163 376 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 RPL26P61254 145 aaKnown RBP10.61□□□□□ -0.71
CAPN3-204ENST00000356316 PTSQ03393 145 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 DPYSL3Q14195 570 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 PTPRRQ15256 657 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 TGIF1Q15583 401 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ODF2Q5BJF6 829 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 PCSK4Q6UW60 755 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ADAMTSL4Q6UY14 1074 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 MARK2Q7KZI7 788 aaKnown RBP10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ZNF765Q7L2R6 523 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 NRROSQ86YC3 692 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 FAM71BQ8TC56 605 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 CCHCR1Q8TD31 782 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 TTC9Q92623 222 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 SGF29Q96ES7 293 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 MED8Q96G25 268 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms