RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 SOD1P00441 154 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 NPY2RP49146 381 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 ZNF140P52738 457 aaPredicted RBP22.07■■□□□ 1.12
SHMT1-203ENST00000354098 PFN3P60673 137 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 TMPRSS15P98073 1019 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 MORF4L2Q15014 288 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 HENMT1Q5T8I9 393 aaKnown RBP22.07■■□□□ 1.12
SHMT1-203ENST00000354098 Q6ZSR6 202 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 MICALCLQ6ZW33 695 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 ZNF765Q7L2R6 523 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 HOOK3Q86VS8 718 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 MPP5Q8N3R9 675 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 ZNF778Q96MU6 729 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 PWWP2AQ96N64 755 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 SYBUQ9NX95 663 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 KCTD5Q9NXV2 234 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 BFARQ9NZS9 450 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 ANAPC5Q9UJX4 755 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 WDR87Q6ZQQ6 2873 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 MROH6A6NGR9 719 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 A6NNZ2 444 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 PRR5-ARHGAP8B1AHC4 643 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 THEGLP0DJG4 465 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 MLNP12872 115 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 IRX4P78413 519 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 BNC1Q01954 994 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 TPRG1LQ5T0D9 272 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 RAET1GQ6H3X3 334 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 KYAT3Q6YP21 454 aaKnown RBP22.07■■□□□ 1.12
SHMT1-203ENST00000354098 PTAR1Q7Z6K3 402 aaPredicted RBP22.07■■□□□ 1.12
SHMT1-203ENST00000354098 CEP76Q8TAP6 659 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 KLHDC7BQ96G42 594 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 DNAJC1Q96KC8 554 aaKnown RBP22.07■■□□□ 1.12
SHMT1-203ENST00000354098 RAB17Q9H0T7 212 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 XAB2Q9HCS7 855 aaKnown RBP22.07■■□□□ 1.12
SHMT1-203ENST00000354098 IL26Q9NPH9 171 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 CHRAC1Q9NRG0 131 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 GRHL1Q9NZI5 618 aa22.07■■□□□ 1.12
SHMT1-203ENST00000354098 AP3B1O00203 1094 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 TLR4O00206 839 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 VILLO15195 856 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 ADRA1DP25100 572 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 FNBP1LQ5T0N5 605 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 SLC23A3Q6PIS1 610 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 SLC22A18ASQ8N1D0 253 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 AGGF1Q8N302 714 aaeCLIP22.06■■□□□ 1.12
SHMT1-203ENST00000354098 RANBP9Q96S59 729 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 LGR4Q9BXB1 951 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 IL22Q9GZX6 179 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 CAPN10Q9HC96 672 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 DMGDHQ9UI17 866 aaKnown RBP22.06■■□□□ 1.12
SHMT1-203ENST00000354098 FKBPLQ9UIM3 349 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 SCN8AQ9UQD0 1980 aa22.06■■□□□ 1.12
SHMT1-203ENST00000354098 ESYT3A0FGR9 886 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 HEATR9A2RTY3 570 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 FADS2P1A8MWK0 482 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 TRIM23P36406 574 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 MAGEA3P43357 314 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 GPR1P46091 355 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 DCDC1P59894 354 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 PDE1BQ01064 536 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 TEAD4Q15561 434 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 PCID2Q5JVF3 399 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 FAM151BQ6UXP7 276 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 RABEPKQ7Z6M1 372 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 IQCHQ86VS3 1027 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 NLRP8Q86W28 1048 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 RUBCNQ92622 972 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 FUBP1Q96AE4 644 aaKnown RBP22.05■■□□□ 1.12
SHMT1-203ENST00000354098 PLEKHG4BQ96PX9 1271 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 APOOQ9BUR5 198 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 SPATA16Q9BXB7 569 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 PARD6AQ9NPB6 346 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 WHRNQ9P202 907 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 SLC2A6Q9UGQ3 507 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 SLC6A14Q9UN76 642 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 ANKRD6Q9Y2G4 727 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 TCAF1Q9Y4C2 921 aa22.05■■□□□ 1.12
SHMT1-203ENST00000354098 ZFHX2Q9C0A1 2572 aaPredicted RBP22.05■■□□□ 1.12
SHMT1-203ENST00000354098 GAPDHSO14556 408 aaPredicted RBP22.04■■□□□ 1.12
SHMT1-203ENST00000354098 TSHRP16473 764 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 SPAM1P38567 509 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 RABIFP47224 123 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 SF3A2Q15428 464 aaKnown RBP22.04■■□□□ 1.12
SHMT1-203ENST00000354098 KIF19Q2TAC6 998 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 MSS51Q4VC12 460 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 SPATS2Q86XZ4 545 aaKnown RBP22.04■■□□□ 1.12
SHMT1-203ENST00000354098 PPHLN1Q8NEY8 458 aaKnown RBP22.04■■□□□ 1.12
SHMT1-203ENST00000354098 RAD18Q9NS91 495 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 SEMA4GQ9NTN9 838 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 NLE1Q9NVX2 485 aaPredicted RBP22.04■■□□□ 1.12
SHMT1-203ENST00000354098 NFKBIL1Q9UBC1 381 aaPredicted RBP22.04■■□□□ 1.12
SHMT1-203ENST00000354098 KHNYNO15037 678 aaKnown RBP22.04■■□□□ 1.12
SHMT1-203ENST00000354098 GPR39O43194 453 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 PPFIA2O75334 1257 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 BANF1O75531 89 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 ZNF806P0C7X5 589 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 TGM1P22735 817 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 C21orf59P57076 290 aa22.04■■□□□ 1.12
SHMT1-203ENST00000354098 GUCY2DQ02846 1103 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms