RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RXFP3Q9NSD7 469 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM74BQ9NUR3 256 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 OSER1Q9NX31 292 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 DLGAP2Q9P1A6 1054 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TUBE1Q9UJT0 475 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FBXW11Q9UKB1 542 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 AAR2Q9Y312 384 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RYR3Q15413 4870 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FNDC1Q4ZHG4 1894 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SPATA31A6Q5VVP1 1343 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GPR75-ASB3A0A0A6YYF3 556 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CDRT15L2A8MXV6 281 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SMIM22K7EJ46 135 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 RNASET2O00584 256 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 HTATSF1O43719 755 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 UGDHO60701 494 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SLC22A3O75751 556 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 B3GALNT1O75752 331 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ACSL3O95573 720 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PTBP3O95758 552 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MT-CO3P00414 261 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PLATP00750 562 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 P4HA1P13674 534 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ETFAP13804 333 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TGM2P21980 687 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CDAP32320 146 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 LMAN1P49257 510 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 KIAA2012Q0VF49 1180 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MTA1Q13330 715 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GALNT3Q14435 633 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 NAB2Q15742 525 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TAZQ16635 292 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PET117Q6UWS5 81 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SDCCAG8Q86SQ7 713 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TERB1Q8NA31 727 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 UXS1Q8NBZ7 420 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 C11orf65Q8NCR3 313 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FAR1Q8WVX9 515 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF653Q96CK0 615 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 HIC2Q96JB3 615 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PBKQ96KB5 322 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PIMREGQ9BSJ6 248 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 LIN28AQ9H9Z2 209 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 KCTD5Q9NXV2 234 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GRHL1Q9NZI5 618 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 EHD3Q9NZN3 535 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CPSF3Q9UKF6 684 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 KLHL20Q9Y2M5 609 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MTF2Q9Y483 593 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TRPM3Q9HCF6 1732 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 A0A0U1RQF3 1178 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 KRT87PA6NCN2 255 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CCNT1O60563 726 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TLR2O60603 784 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 RGS11O94810 467 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 REC8O95072 547 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 NFATC1O95644 943 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GBAP04062 536 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 WNT1P04628 370 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ICAM1P05362 532 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CD63P08962 238 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ACHEP22303 614 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 EEF1DP29692 281 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 HOXA7P31268 230 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CDKN1AP38936 164 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CYP2J2P51589 502 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PRAMEP78395 509 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 HHEXQ03014 270 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SOWAHAQ2M3V2 549 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 SPDYE7PQ495Y7 208 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM119Q4V9L6 283 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FBLN7Q53RD9 439 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 STRIP1Q5VSL9 837 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM88Q6PEY1 159 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM65Q6PI78 240 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MARK2Q7KZI7 788 aaKnown RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CENPVQ7Z7K6 275 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GPSM1Q86YR5 675 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 CNTN4Q8IWV2 1026 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FAM217AQ8IXS0 508 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GALNT16Q8N428 558 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 AMER2Q8N7J2 671 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ABHD11Q8NFV4 315 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 OR52N4Q8NGI2 321 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ZFPM2Q8WW38 1151 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 POMGNT1Q8WZA1 660 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 DDOQ99489 341 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MGME1Q9BQP7 344 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 FZD8Q9H461 694 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 MVB12BQ9H7P6 319 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 BPIFA1Q9NP55 256 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ASAH2Q9NR71 780 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 ARGLU1Q9NWB6 273 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 A3GALT2U3KPV4 340 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 H0YIG0 161 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 PRPF4O43172 522 aaKnown RBP eCLIP1.66□□□□□ -2.145e-17■■■■■ 29.7
BRCA1-202ENST00000354071 RECQL5O94762 991 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-202ENST00000354071 NPSP0C0P6 89 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 GAP43P17677 238 aa1.66□□□□□ -2.14
BRCA1-202ENST00000354071 DDX5P17844 614 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms