RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 IMP4Q96G21 291 aaKnown RBP14.39□□□□□ -0.11
HMGN3-202ENST00000344726 AGAP3Q96P47 875 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 DEPDC7Q96QD5 511 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 TRIB3Q96RU7 358 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 LYSMD1Q96S90 227 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 CCDC3Q9BQI4 270 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 HERPUD2Q9BSE4 406 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 FRMD8Q9BZ67 464 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-202ENST00000344726 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 BRD8Q9H0E9 1235 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 TMEM168Q9H0V1 697 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 ABCG4Q9H172 646 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 CYP4F12Q9HCS2 524 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 HAUS2Q9NVX0 235 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 KCTD5Q9NXV2 234 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 NCKIPSDQ9NZQ3 722 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 GULP1Q9UBP9 304 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 PADI4Q9UM07 663 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 ENTPD2Q9Y5L3 495 aa14.39□□□□□ -0.11
HMGN3-202ENST00000344726 A0A0U1RQJ8 604 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 GOLGA6CA6NDK9 693 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 GOLGA6BA6NDN3 693 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 ANKRD66B4E2M5 251 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 GOLGA6DP0CG33 693 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 KELP23276 732 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 PTPN3P26045 913 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 TEAD1P28347 426 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 POLD2P49005 469 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 NR2C2P49116 596 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 RPL26P61254 145 aaKnown RBP14.38□□□□□ -0.11
HMGN3-202ENST00000344726 TFDP2Q14188 446 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 GALNT3Q14435 633 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 TBC1D25Q3MII6 688 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 TEX44Q53QW1 395 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 GKN2Q86XP6 184 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 AP2M1Q96CW1 435 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 EID2BQ96D98 161 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 ATXN7L3BQ96GX2 97 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 WDR24Q96S15 920 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 SLC25A51Q9H1U9 297 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 LUC7LQ9NQ29 371 aaKnown RBP14.38□□□□□ -0.11
HMGN3-202ENST00000344726 PHPT1Q9NRX4 125 aaPredicted RBP14.38□□□□□ -0.11
HMGN3-202ENST00000344726 EVA1BQ9NVM1 165 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 GOLGA6AQ9NYA3 693 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 MOSPD1Q9UJG1 213 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 RPL26L1Q9UNX3 145 aaKnown RBP14.38□□□□□ -0.11
HMGN3-202ENST00000344726 GPR34Q9UPC5 381 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 DOLKQ9UPQ8 538 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 ST14Q9Y5Y6 855 aa14.38□□□□□ -0.11
HMGN3-202ENST00000344726 A0A1W2PQM1 296 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 NTN3O00634 580 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 PJA2O43164 708 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 NOBOXO60393 691 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 ZRANB2O95218 330 aaKnown RBP eCLIP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 MT-CYBP00156 380 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 CA4P22748 312 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 CD68P34810 354 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 CTNNA1P35221 906 aaKnown RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 GPR1P46091 355 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 GABREP78334 506 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 WASHC5Q12768 1159 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 ZNF765Q7L2R6 523 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 KDELC2Q7Z4H8 507 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 TRIM74Q86UV6 250 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 NT5DC3Q86UY8 548 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 ZC3H18Q86VM9 953 aaKnown RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 NRROSQ86YC3 692 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 CCDC50Q8IVM0 306 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 RCOR2Q8IZ40 523 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 SDR16C5Q8N3Y7 309 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 GPR156Q8NFN8 814 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 EXD1Q8NHP7 514 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 GLMNQ92990 594 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 PRR11Q96HE9 360 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 BBC3Q96PG8 261 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 BAG1Q99933 345 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 MLPHQ9BV36 600 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 RIOK2Q9BVS4 552 aaKnown RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 HEMGNQ9BXL5 484 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 SUDS3Q9H7L9 328 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 CARS2Q9HA77 564 aaKnown RBP14.37□□□□□ -0.11
HMGN3-202ENST00000344726 GLOD4Q9HC38 313 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 ASCL3Q9NQ33 180 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 SUFUQ9UMX1 484 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 SATB2Q9UPW6 733 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 PTPRQQ9UMZ3 2332 aa14.37□□□□□ -0.11
HMGN3-202ENST00000344726 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 BTNL10A8MVZ5 291 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 PDE2AO00408 941 aaPredicted RBP14.36□□□□□ -0.11
HMGN3-202ENST00000344726 PIRTP0C851 137 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 RPIAP49247 311 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 VAV2P52735 878 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 PCSK7Q16549 785 aa14.36□□□□□ -0.11
HMGN3-202ENST00000344726 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms