RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NDUFS3O75489 264 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 HOXB8P17481 243 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 CTPS1P17812 591 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 TFEBP19484 476 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 CDKN1CP49918 316 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 PLEKHG6Q3KR16 790 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 RALGPS1Q5JS13 557 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 ARMC12Q5T9G4 340 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 FAM109BQ6ICB4 259 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 TRIM67Q6ZTA4 783 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 CFAP61Q8NHU2 1237 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 ALG9Q9H6U8 611 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 NCKIPSDQ9NZQ3 722 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 EVLQ9UI08 416 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 FZD6O60353 706 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 WISP3O95389 354 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 PFKLP17858 780 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 FMO4P31512 558 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 MC4RP32245 332 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 BMP8BP34820 402 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 RPL14P50914 215 aaKnown RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 PLK1P53350 603 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 COPAP53621 1224 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 PFKPQ01813 784 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 PRKAA1Q13131 559 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 SLC9B1Q4ZJI4 515 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 C6orf163Q5TEZ5 329 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 NET1Q7Z628 596 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 TDHQ8IZJ6 230 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 RPL10LQ96L21 214 aaKnown RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 AARSD1Q9BTE6 412 aaKnown RBP18.56■□□□□ 0.56
HOXA9-201ENST00000343483 TNKS2Q9H2K2 1166 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 ABCB8Q9NUT2 735 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 LRRC42Q9Y546 428 aa18.56■□□□□ 0.56
HOXA9-201ENST00000343483 RHOP08100 348 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 ALPIP09923 528 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 PTPN2P17706 415 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 KCNA5P22460 613 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 GKP32189 559 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 IRS1P35568 1242 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 CPOXP36551 454 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 SLC26A3P40879 764 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 CLNS1AP54105 237 aaKnown RBP18.55■□□□□ 0.56
HOXA9-201ENST00000343483 TIAL1Q01085 375 aaKnown RBP eCLIP18.55■□□□□ 0.56
HOXA9-201ENST00000343483 PDAP1Q13442 181 aaKnown RBP18.55■□□□□ 0.56
HOXA9-201ENST00000343483 ZRANB3Q5FWF4 1079 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 RYBPQ8N488 228 aaPredicted RBP18.55■□□□□ 0.56
HOXA9-201ENST00000343483 TTC30BQ8N4P2 665 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 RIN3Q8TB24 985 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 MAPK15Q8TD08 544 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 HERVK_113Q902F9 699 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 LPGAT1Q92604 370 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 PPP1R36Q96LQ0 422 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 CCDC68Q9H2F9 335 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 HACD3Q9P035 362 aa18.55■□□□□ 0.56
HOXA9-201ENST00000343483 INTS6Q9UL03 887 aaKnown RBP18.55■□□□□ 0.56
HOXA9-201ENST00000343483 LINC01553A4QN01 128 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 A8MT66 165 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 GRXCR1A8MXD5 290 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 SRP72O76094 671 aaKnown RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PGLSO95336 258 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 BMP1P13497 986 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 DNAJB13P59910 316 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 SLC25A3Q00325 362 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 BCL2L1Q07817 233 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 SLC5A9Q2M3M2 681 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 ARHGAP15Q53QZ3 475 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 SEL1L3Q68CR1 1132 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PSAPL1Q6NUJ1 521 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PIWIL4Q7Z3Z4 852 aaKnown RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PIANPQ8IYJ0 282 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 LSMEM2Q8N112 164 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 USP13Q92995 863 aaPredicted RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 CMTM5Q96DZ9 223 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PHF21BQ96EK2 531 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 GPR63Q9BZJ6 419 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 ZDHHC2Q9UIJ5 367 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 FAM50BQ9Y247 325 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PKP3Q9Y446 797 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 ZNF711Q9Y462 761 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 E9PBE3 544 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 F8W8V4 182 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 MATN2O00339 956 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 ZBTB14O43829 449 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 KLHL41O60662 606 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 IPO13O94829 963 aaKnown RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 RHOBTB1O94844 696 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PRAMEF12O95522 483 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 FGF19O95750 216 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 EPCAMP16422 314 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 ZNF37AP17032 561 aaPredicted RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 PSMA3P25788 255 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 CTSOP43234 321 aaPredicted RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 SLC34A1Q06495 639 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 TRMT5Q32P41 509 aaKnown RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 LYSMD3Q7Z3D4 306 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 DTX3LQ8TDB6 740 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 CCDC126Q96EE4 140 aa18.54■□□□□ 0.56
HOXA9-201ENST00000343483 NAF1Q96HR8 494 aaKnown RBP18.54■□□□□ 0.56
HOXA9-201ENST00000343483 TCF12Q99081 682 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms