RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 RECQLP46063 649 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 CDKN1CP49918 316 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 SLC25A3Q00325 362 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 LMAN2Q12907 356 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ITGA9Q13797 1035 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 GRM2Q14416 872 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 RBM20Q5T481 1227 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 MBLAC2Q68D91 279 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 Q6ZVU0 165 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PLD6Q8N2A8 252 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 CASS4Q9NQ75 786 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ANGPTL2Q9UKU9 493 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 YBX2Q9Y2T7 364 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ANKRD12Q6UB98 2062 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 F8W8V4 182 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 AHSGP02765 367 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 FGF3P11487 239 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 FMO4P31512 558 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 SLC1A2P43004 574 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 NPY2RP49146 381 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ZNF135P52742 658 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PDE1CQ14123 709 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 DNAL1Q4LDG9 190 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 TCEAL5Q5H9L2 206 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 TEDDM1Q5T9Z0 273 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 C6orf163Q5TEZ5 329 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 FAM219BQ5XKK7 198 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 TMEM53Q6P2H8 277 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PIM3Q86V86 326 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 CEP70Q8NHQ1 597 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 DDX18Q9NVP1 670 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 TMEM216Q9P0N5 145 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 FBXO5Q9UKT4 447 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PPM1HQ9ULR3 514 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 XPAP23025 273 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 YBEYP58557 167 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 ACTR3P61158 418 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TRMT5Q32P41 509 aaKnown RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 SPANXN3Q5MJ09 141 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TIFABQ6ZNK6 161 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 SCML4Q8N228 414 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 RAB3IL1Q8TBN0 382 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 MAGEH1Q9H213 219 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 RC3H2Q9HBD1 1191 aaKnown RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 UBAP1Q9NZ09 502 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 IL37Q9NZH6 218 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 MARCH4Q9P2E8 410 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TMEM247A6NEH6 219 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 NEMP2A6NFY4 417 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TK2O00142 265 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 NEMP1O14524 444 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 C2P06681 752 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TYRP14679 529 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 CPOXP36551 454 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 SLC1A6P48664 564 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TUBB3Q13509 450 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 RETSATQ6NUM9 610 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 FAM151BQ6UXP7 276 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 IZUMO2Q6UXV1 221 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 WDR75Q8IWA0 830 aaKnown RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 RIN3Q8TB24 985 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 PIWIL2Q8TC59 973 aaKnown RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 PPP4R1Q8TF05 950 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 USP13Q92995 863 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TSGA13Q96PP4 275 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 C2orf49Q9BVC5 232 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-201ENST00000342220 PNPOQ9NVS9 261 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 TCAF1Q9Y4C2 921 aa13.05□□□□□ -0.32
COL18A1-201ENST00000342220 ZCWPW2A0A1B0GU75 182 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 HLA-EP13747 358 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 MAPKAPK2P49137 400 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 ARF5P84085 180 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 KYAT3Q6YP21 454 aaKnown RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 BEND5Q7L4P6 421 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 C10orf107Q8IVU9 208 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 SPO11Q9Y5K1 396 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 A0A088AWK7 358 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 FAM95CA0A1B0GW59 222 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 SORBS2O94875 1100 aaKnown RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 CCR10P46092 362 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 EIF4EBP2Q13542 120 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 CAMK1Q14012 370 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 CCDC85BQ15834 202 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 VWA5B1Q5TIE3 1220 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 KLC3Q6P597 504 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 NAT9Q9BTE0 207 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 NDE1Q9NXR1 346 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 HECAQ9UBI9 543 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-201ENST00000342220 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 C1orf232A0A0U1RR37 186 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 IQCF5A8MTL0 148 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 PLIN3O60664 434 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 MLNP12872 115 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 CHRM3P20309 590 aa13.04□□□□□ -0.32
COL18A1-201ENST00000342220 ARRB2P32121 409 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms