RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 MFSD1Q9H3U5 465 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 LGALS13Q9UHV8 139 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 SLC24A2Q9UI40 661 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 FBXO5Q9UKT4 447 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 ALDOAP04075 364 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 ITGA2BP08514 1039 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 FOXN2P32314 431 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 LIG3P49916 1009 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 PPM1JQ5JR12 505 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 AGBL4Q5VU57 503 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 TTC19Q6DKK2 380 aaPredicted RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 ZNF852Q6ZMS4 543 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 ERN2Q76MJ5 926 aaKnown RBP13.85□□□□□ -0.19
PMS1-201ENST00000342075 HDDC3Q8N4P3 179 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 KLK6Q92876 244 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 BOCQ9BWV1 1114 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 CATSPERZQ9NTU4 200 aa13.85□□□□□ -0.19
PMS1-201ENST00000342075 KNL1Q8NG31 2342 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 TCRBV21S2A2A0A5A6 115 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 FAM47DPA6NHR8 397 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 POLR2LP62875 67 aaKnown RBP13.84□□□□□ -0.19
PMS1-201ENST00000342075 MPP2Q14168 576 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 CHRNA6Q15825 494 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 TRABD2AQ86V40 505 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 ZC3HC1Q86WB0 502 aaKnown RBP13.84□□□□□ -0.19
PMS1-201ENST00000342075 TDRPQ86YL5 185 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 GANCQ8TET4 914 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 LRIG1Q96JA1 1093 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 RBBP8Q99708 897 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 MCMBPQ9BTE3 642 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 OSBPL6Q9BZF3 934 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 LMAN1LQ9HAT1 526 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 HACD3Q9P035 362 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 DKK3Q9UBP4 350 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 MBD1Q9UIS9 605 aaPredicted RBP13.84□□□□□ -0.19
PMS1-201ENST00000342075 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 K7ESM1 405 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 NEMP1O14524 444 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 SLC7A4O43246 635 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 MTX2O75431 263 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 PDGFBP01127 241 aaPredicted RBP13.84□□□□□ -0.19
PMS1-201ENST00000342075 NDUFV2P19404 249 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 VIPR1P32241 457 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 PXNP49023 591 aaPredicted RBP13.84□□□□□ -0.19
PMS1-201ENST00000342075 ARHGEF7Q14155 803 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 ZNF648Q5T619 568 aaPredicted RBP13.84□□□□□ -0.19
PMS1-201ENST00000342075 LIPIQ6XZB0 460 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 TRIM67Q6ZTA4 783 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 CYS1Q717R9 158 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 TAS2R42Q7RTR8 314 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 CNTN4Q8IWV2 1026 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 DCLK2Q8N568 766 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 C2CD4AQ8NCU7 369 aaPredicted RBP13.84□□□□□ -0.19
PMS1-201ENST00000342075 HMGB4Q8WW32 186 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 VPS39Q96JC1 886 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 MED4Q9NPJ6 270 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 DYRK4Q9NR20 520 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 TXNDC16Q9P2K2 825 aa13.84□□□□□ -0.19
PMS1-201ENST00000342075 CACNA1IQ9P0X4 2223 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 STK25O00506 426 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 TPP1O14773 563 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 ELFN1P0C7U0 828 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 KRT4P19013 534 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 GP5P40197 560 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 STARD3Q14849 445 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 SEL1L3Q68CR1 1132 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 SDE2Q6IQ49 451 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 NLRP9Q7RTR0 991 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 SLC41A1Q8IVJ1 513 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 FRMD1Q8N878 549 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 GPATCH11Q8N954 259 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 OR2T3Q8NH03 318 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 SPOCK2Q92563 424 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 MRGPRX1Q96LB2 322 aa13.83□□□□□ -0.19
PMS1-201ENST00000342075 FAM170BA6NMN3 283 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 C1QTNF3-AMACRE9PGA6 284 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 AREL1O15033 823 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 SRP72O76094 671 aaKnown RBP13.83□□□□□ -0.2
PMS1-201ENST00000342075 S1PR4O95977 384 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 PYGBP11216 843 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 SPINT3P49223 89 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 NEK3P51956 506 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 STC1P52823 247 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 ACOX1Q15067 660 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 ATP13A5Q4VNC0 1218 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 KIAA1324Q6UXG2 1013 aaKnown RBP13.83□□□□□ -0.2
PMS1-201ENST00000342075 DPPA4Q7L190 304 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 PIM3Q86V86 326 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 SPATA6LQ8N4H0 392 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 CPNE1Q99829 537 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 TRABDQ9H4I3 376 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 FBXL12Q9NXK8 326 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 TMPRSS11EQ9UL52 423 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 SLC39A10Q9ULF5 831 aa13.83□□□□□ -0.2
PMS1-201ENST00000342075 GLYATL1P3A0A0U1RQE8 302 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 PHGDHO43175 533 aaKnown RBP13.82□□□□□ -0.2
PMS1-201ENST00000342075 RFPL1O75677 317 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 GLULP15104 373 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 IRF9Q00978 393 aa13.82□□□□□ -0.2
PMS1-201ENST00000342075 CRY1Q16526 586 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms