RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 GPR34Q9UPC5 381 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 KNTC1P50748 2209 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 ANKRD11Q6UB99 2663 aaPredicted RBP13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 CFAP47Q6ZTR5 3102 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 C1orf232A0A0U1RR37 186 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 CPED1A4D0V7 1026 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 PJA2O43164 708 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 CEACAM5P06731 702 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 IVLP07476 585 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 PTPN7P35236 360 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 CETN2P41208 172 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 TNNT3P45378 269 aaPredicted RBP13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 NAP1L1P55209 391 aaKnown RBP13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 ILF3Q12906 894 aaKnown RBP eCLIP13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 XRCC4Q13426 336 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 IHHQ14623 411 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 QPCTQ16769 361 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 KAZNQ674X7 775 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 CCDC70Q6NSX1 233 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 GUSBP11Q6P575 273 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 NPNTQ6UXI9 565 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 BBS12Q6ZW61 710 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 TAF8Q7Z7C8 310 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 PELI3Q8N2H9 469 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 MDM1Q8TC05 714 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 KIAA1524Q8TCG1 905 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 LRRN4Q8WUT4 740 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZDHHC16Q969W1 377 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 TEKT5Q96M29 485 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 AGAP3Q96P47 875 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 GSDMCQ9BYG8 508 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 ABCG8Q9H221 673 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 CARS2Q9HA77 564 aaKnown RBP13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 GLOD4Q9HC38 313 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 CYP4F12Q9HCS2 524 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 RAD18Q9NS91 495 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 PKD2L2Q9NZM6 624 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 PADI4Q9UM07 663 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 SLC17A4Q9Y2C5 497 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 PCDHA3Q9Y5H8 950 aa13.29□□□□□ -0.28
SIRPB3P-201ENST00000340424 APOC4-APOC2K7ER74 178 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 SOD1P00441 154 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 APOC2P02655 101 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 CELA2BP08218 269 aaPredicted RBP13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 PNLIPP16233 465 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 PTPN3P26045 913 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 SPINT3P49223 89 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 CDK18Q07002 472 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 CYP4F3Q08477 520 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 OGFOD3Q6PK18 319 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 RAD9BQ6WBX8 426 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 RBM44Q6ZP01 1051 aaKnown RBP13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 KIAA1328Q86T90 577 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 MARCH9Q86YJ5 346 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 SYCE1Q8N0S2 351 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 LSMEM2Q8N112 164 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 KYQ8NBH2 561 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 GPR156Q8NFN8 814 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 GPBAR1Q8TDU6 330 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 UBE2Q2Q8WVN8 375 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 SCARF2Q96GP6 870 aaPredicted RBP13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 HIC2Q96JB3 615 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 QKIQ96PU8 341 aaKnown RBP eCLIP13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 TRIB3Q96RU7 358 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 GOLPH3Q9H4A6 298 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 MAGEE1Q9HCI5 957 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 MRPL40Q9NQ50 206 aaKnown RBP13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 MOSPD1Q9UJG1 213 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 TRHDEQ9UKU6 1024 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 REXO2Q9Y3B8 237 aaKnown RBP13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
SIRPB3P-201ENST00000340424 RCCD1A6NED2 376 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 TAF4O00268 1085 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZW10O43264 779 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CSO75390 466 aaKnown RBP13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CLDN7O95471 211 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 EPOP01588 193 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 MYF5P13349 255 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 GLB1P16278 677 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 PECAM1P16284 738 aaPredicted RBP13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CTNNA2P26232 953 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 MARCKSL1P49006 195 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CLDN6P56747 220 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 RWDD2BP57060 319 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 DCDC1P59894 354 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 KIF5AQ12840 1032 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 LRP8Q14114 963 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCDC181Q5TID7 509 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 PDPK2PQ6A1A2 396 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 FAM46DQ8NEK8 389 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 HTR3CQ8WXA8 447 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 KRT35Q92764 455 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 COX14Q96I36 57 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCDC3Q9BQI4 270 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms