RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TPM3P06753 285 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 FAM228BP0C875 321 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 HGFP14210 728 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 CCNCP24863 283 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 TEAD1P28347 426 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 GPR3P46089 330 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 POLD2P49005 469 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 MAPK10P53779 464 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 OR1D5P58170 312 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 ZFP36L1Q07352 338 aaKnown RBP10.63□□□□□ -0.71
CAPN3-202ENST00000337571 DPTQ07507 201 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 PDK2Q15119 407 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 IFI16Q16666 785 aaKnown RBP10.63□□□□□ -0.71
CAPN3-202ENST00000337571 CLPPQ16740 277 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-202ENST00000337571 TXNRD3NBQ6F5E7 133 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 DOK6Q6PKX4 331 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 TSPAN33Q86UF1 283 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 LUZP1Q86V48 1076 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 PELI3Q8N2H9 469 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 CBARPQ8N350 705 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-202ENST00000337571 TEX26Q8N6G2 289 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 ZSCAN1Q8NBB4 408 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 FRMD8Q9BZ67 464 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-202ENST00000337571 CDH19Q9H159 772 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 CBX8Q9HC52 389 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 RBM22Q9NW64 420 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN3-202ENST00000337571 TAAR2Q9P1P5 351 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 CTTNBP2NLQ9P2B4 639 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 AMACRQ9UHK6 382 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 CD84Q9UIB8 345 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 LCMT1Q9UIC8 334 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 DNPEPQ9ULA0 475 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 PPIL1Q9Y3C6 166 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 UNC13CQ8NB66 2214 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 FASNP49327 2511 aaKnown RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 MATN3O15232 486 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 B4GAT1O43505 415 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ASMTLO95671 621 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 IVLP07476 585 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 PDHA1P08559 390 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 KRT7P08729 469 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 H2AFZP0C0S5 128 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 LIPCP11150 499 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ZNF30P17039 623 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 MX2P20592 715 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 LHCGRP22888 699 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 IL4RP24394 825 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 AK4P27144 223 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 GJC1P36383 396 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ADCY8P40145 1251 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 GARSP41250 739 aaKnown RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 B4GALNT1Q00973 533 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 CTBSQ01459 385 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 SLC25A11Q02978 314 aaKnown RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 GALNT2Q10471 571 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 LY6DQ14210 128 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 PAFAH1B3Q15102 231 aaKnown RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ANKRD20A8PQ5CZ79 823 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 MANEAQ5SRI9 462 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 KIAA1614Q5VZ46 1190 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 LRRC66Q68CR7 880 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 H2AFVQ71UI9 128 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 TECPR1Q7Z6L1 1165 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 NLRP8Q86W28 1048 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 GALNT13Q8IUC8 556 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 SFTPA2Q8IWL1 248 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 NRSN1Q8IZ57 195 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 CCNYQ8ND76 341 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 CCDC112Q8NEF3 446 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 EXD1Q8NHP7 514 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ZNF564Q8TBZ8 553 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 PIH1D2Q8WWB5 315 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 CTNNBL1Q8WYA6 563 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 USP7Q93009 1102 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 AHCYL2Q96HN2 611 aaKnown RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 MCCC1Q96RQ3 725 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ARHGAP9Q9BRR9 750 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ZMYND15Q9H091 742 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ABCG8Q9H221 673 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 SEMA6CQ9H3T2 930 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 RDH14Q9HBH5 336 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ZNHIT2Q9UHR6 403 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 ACSL6Q9UKU0 697 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 SLC17A4Q9Y2C5 497 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 TMEM98Q9Y2Y6 226 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.62□□□□□ -0.71
CAPN3-202ENST00000337571 PTPRQQ9UMZ3 2332 aa10.62□□□□□ -0.71
CAPN3-202ENST00000337571 PRAMEF33A0A0G2JMD5 474 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 A0A0J9YYE9 177 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 PRAMEF10O60809 474 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 TRBC1P01850 177 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 FUCA1P04066 466 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 CD48P09326 243 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 ITIH1P19827 911 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 CD82P27701 267 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 ACTR1BP42025 376 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 MAZP56270 477 aaKnown RBP10.61□□□□□ -0.71
CAPN3-202ENST00000337571 ACTR1AP61163 376 aa10.61□□□□□ -0.71
CAPN3-202ENST00000337571 RPL26P61254 145 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms