RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 HADHAP40939 763 aa19.02■□□□□ 0.63
LAMP1-201ENST00000332556 LPCAT2Q7L5N7 544 aa19.02■□□□□ 0.63
LAMP1-201ENST00000332556 TMCO2Q7Z6W1 182 aaPredicted RBP19.02■□□□□ 0.63
LAMP1-201ENST00000332556 ATP6V0D2Q8N8Y2 350 aa19.02■□□□□ 0.63
LAMP1-201ENST00000332556 BTN2A3PQ96KV6 586 aa19.02■□□□□ 0.63
LAMP1-201ENST00000332556 FBXO44Q9H4M3 255 aa19.02■□□□□ 0.63
LAMP1-201ENST00000332556 NOL11Q9H8H0 719 aaKnown RBP19.02■□□□□ 0.63
LAMP1-201ENST00000332556 TRIM38O00635 465 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 H2AFYO75367 372 aaKnown RBP19.01■□□□□ 0.63
LAMP1-201ENST00000332556 LEPRP48357 1165 aaKnown RBP19.01■□□□□ 0.63
LAMP1-201ENST00000332556 IKBKEQ14164 716 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 USP41Q3LFD5 358 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 SCIMPQ6UWF3 145 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 SETD3Q86TU7 594 aaPredicted RBP19.01■□□□□ 0.63
LAMP1-201ENST00000332556 TMEM126BQ8IUX1 230 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 DENND1CQ8IV53 801 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 C1orf74Q96LT6 269 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 NACA2Q9H009 215 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 TDRKHQ9Y2W6 561 aaKnown RBP19.01■□□□□ 0.63
LAMP1-201ENST00000332556 AP3B1O00203 1094 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 FOXD2O60548 495 aaPredicted RBP19.01■□□□□ 0.63
LAMP1-201ENST00000332556 HSPA13P48723 471 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 TIAL1Q01085 375 aaKnown RBP eCLIP19.01■□□□□ 0.632e-7■■□□□ 14.3
LAMP1-201ENST00000332556 SERINC3Q13530 473 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 PFKFB4Q16877 469 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 KRT80Q6KB66 452 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 ISCA2Q86U28 154 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 LPGAT1Q92604 370 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 SCLYQ96I15 445 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 ATP13A1Q9HD20 1204 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 TIMMDC1Q9NPL8 285 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 MARCH5Q9NX47 278 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 BTRCQ9Y297 605 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 PCDHGC4Q9Y5F7 938 aa19.01■□□□□ 0.63
LAMP1-201ENST00000332556 ZFP37Q9Y6Q3 630 aaPredicted RBP19.01■□□□□ 0.63
LAMP1-201ENST00000332556 A0A087X1B8 175 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 NBNO60934 754 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 ATF6P18850 670 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 FMO4P31512 558 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 PFKPQ01813 784 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 OR4D1Q15615 310 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 NFE2Q16621 373 aaPredicted RBP19■□□□□ 0.63
LAMP1-201ENST00000332556 AGAP9Q5VTM2 703 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 KLHL35Q6PF15 583 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 CYHR1Q6ZMK1 362 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 BEND5Q7L4P6 421 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 RNF180Q86T96 592 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 HERC6Q8IVU3 1022 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 CD99L2Q8TCZ2 262 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 SLCO4A1Q96BD0 722 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 PPWD1Q96BP3 646 aaKnown RBP19■□□□□ 0.63
LAMP1-201ENST00000332556 RMDN1Q96DB5 314 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 GTF3C5Q9Y5Q8 519 aaPredicted RBP19■□□□□ 0.63
LAMP1-201ENST00000332556 UNC80Q8N2C7 3258 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 PRORSD1PA6NEY8 169 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 SLC2A3P11169 496 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 TACR2P21452 398 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 SREBF2Q12772 1141 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 TRIM25Q14258 630 aaKnown RBP19■□□□□ 0.63
LAMP1-201ENST00000332556 CPNE9Q8IYJ1 553 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 ASB9Q96DX5 294 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 C8orf48Q96LL4 319 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 GSTO2Q9H4Y5 243 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 SMPD4Q9NXE4 827 aa19■□□□□ 0.63
LAMP1-201ENST00000332556 TIPRLO75663 272 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 H6PDO95479 791 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 COL6A2P12110 1019 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 PRKAA2P54646 552 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 TRIP4Q15650 581 aaPredicted RBP18.99■□□□□ 0.63
LAMP1-201ENST00000332556 PCSK9Q8NBP7 692 aaKnown RBP18.99■□□□□ 0.63
LAMP1-201ENST00000332556 DIS3LQ8TF46 1054 aaKnown RBP18.99■□□□□ 0.63
LAMP1-201ENST00000332556 PRKD2Q9BZL6 878 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 TLR8Q9NR97 1041 aaKnown RBP18.99■□□□□ 0.63
LAMP1-201ENST00000332556 COL4A4P53420 1690 aaPredicted RBP18.99■□□□□ 0.63
LAMP1-201ENST00000332556 MROH6A6NGR9 719 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 TMX2-CTNND1H3BSU7 103 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 CD3EAPO15446 510 aaKnown RBP18.99■□□□□ 0.63
LAMP1-201ENST00000332556 ZNF23P17027 643 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 SH3BP2P78314 561 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 GPNMBQ14956 572 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 PLA2G4EQ3MJ16 856 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 HMBOX1Q6NT76 420 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 MSANTD2Q6P1R3 559 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 EFHBQ8N7U6 833 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 PTGR2Q8N8N7 351 aaPredicted RBP18.99■□□□□ 0.63
LAMP1-201ENST00000332556 ZNF597Q96LX8 424 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 FAM210AQ96ND0 272 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 STARD7Q9NQZ5 370 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 OLAHQ9NV23 265 aa18.99■□□□□ 0.63
LAMP1-201ENST00000332556 FBP2O00757 339 aa18.98■□□□□ 0.63
LAMP1-201ENST00000332556 CAPNS1P04632 268 aa18.98■□□□□ 0.63
LAMP1-201ENST00000332556 PIWIL4Q7Z3Z4 852 aaKnown RBP18.98■□□□□ 0.63
LAMP1-201ENST00000332556 UBXN10Q96LJ8 280 aa18.98■□□□□ 0.63
LAMP1-201ENST00000332556 SLC30A3Q99726 388 aa18.98■□□□□ 0.63
LAMP1-201ENST00000332556 DCUN1D5Q9BTE7 237 aa18.98■□□□□ 0.63
LAMP1-201ENST00000332556 VTI1BQ9UEU0 232 aa18.98■□□□□ 0.63
LAMP1-201ENST00000332556 PRRC2BQ5JSZ5 2229 aaKnown RBP18.98■□□□□ 0.63
LAMP1-201ENST00000332556 A0A1W2PQ45 241 aaPredicted RBP18.98■□□□□ 0.63
LAMP1-201ENST00000332556 A0A1W2PQY0 241 aa18.98■□□□□ 0.63
LAMP1-201ENST00000332556 ZNF839A8K0R7 811 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms