RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 NELFEP18615 380 aaKnown RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PAX3P23760 479 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 VEGFBP49765 207 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PRKCQQ04759 706 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 SLC39A12Q504Y0 691 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 ERMP1Q7Z2K6 904 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 NUP93Q8N1F7 819 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PGBD5Q8N414 524 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 TWIST2Q8WVJ9 160 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 TADA1Q96BN2 335 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 ANKRD60Q9BZ19 345 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 DUS2Q9NX74 493 aaKnown RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PTGDR2Q9Y5Y4 395 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 DOCK4Q8N1I0 1966 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 A0A0U1RQF3 1178 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 NME4O00746 187 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 SOCS2O14508 198 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 AZIN1O14977 448 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PIP5K1BO14986 540 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 KPNA6O60684 536 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 GOT2P00505 430 aaKnown RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 TYMPP19971 482 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PCSK6P29122 969 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 SLC5A2P31639 672 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 ETFBP38117 255 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 TIAL1Q01085 375 aaKnown RBP eCLIP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PFKFB4Q16877 469 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 VPS26BQ4G0F5 336 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 NHSL2Q5HYW2 709 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 SDHAF4Q5VUM1 108 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 MSANTD2Q6P1R3 559 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 PRMT9Q6P2P2 845 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 MIER2Q8N344 545 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 RMND5BQ96G75 393 aaPredicted RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 ZNF512Q96ME7 567 aaPredicted RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 UROC1Q96N76 676 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 TCF12Q99081 682 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 CCM2LQ9NUG4 571 aaPredicted RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 ABI2Q9NYB9 513 aaPredicted RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 ABCD2Q9UBJ2 740 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 GIMAP2Q9UG22 337 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 LRRC14BA6NHZ5 514 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 UBXN8O00124 270 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 CD3EAPO15446 510 aaKnown RBP15.33■□□□□ 0.04
BRCC3-201ENST00000330045 FOXA1P55317 472 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 ACVR1Q04771 509 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 ILF2Q12905 390 aaKnown RBP15.33■□□□□ 0.04
BRCC3-201ENST00000330045 GRB7Q14451 532 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 OR4D1Q15615 310 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 MRNIPQ6NTE8 343 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 DDIASQ8IXT1 998 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 FAM110BQ8TC76 370 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
BRCC3-201ENST00000330045 AURKCQ9UQB9 309 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 SCML2Q9UQR0 700 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 ARL5AQ9Y689 179 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 AQP12BA6NM10 295 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 PLOD2O00469 737 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 ANGPT2O15123 496 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 TRMUO75648 421 aaKnown RBP15.33■□□□□ 0.04
BRCC3-201ENST00000330045 MTHFD2P13995 350 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 ZNF37AP17032 561 aaPredicted RBP15.33■□□□□ 0.04
BRCC3-201ENST00000330045 HOXB8P17481 243 aaPredicted RBP15.33■□□□□ 0.04
BRCC3-201ENST00000330045 CAPN3P20807 821 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 ALDH3B2P48448 385 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 ATP6V0D1P61421 351 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 TNK2Q07912 1038 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 PTPRCAPQ14761 206 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 TBCELQ5QJ74 424 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 IL31Q6EBC2 164 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 AQP12AQ8IXF9 295 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 MINDY1Q8N5J2 469 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 GRIN3AQ8TCU5 1115 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 RAET1EQ8TD07 263 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 BLOC1S5Q8TDH9 187 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 TRIM15Q9C019 465 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 HSFX1Q9UBD0 423 aa15.33■□□□□ 0.04
BRCC3-201ENST00000330045 RSL24D1Q9UHA3 163 aaKnown RBP15.33■□□□□ 0.04
BRCC3-201ENST00000330045 CASP8AP2Q9UKL3 1982 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 HNRNPRO43390 633 aaKnown RBP15.32■□□□□ 0.04
BRCC3-201ENST00000330045 ACLYP53396 1101 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 DDR2Q16832 855 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 KANK2Q63ZY3 851 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 SPPL2CQ8IUH8 684 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 PHYKPLQ8IUZ5 450 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 SLC15A3Q8IY34 581 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 ATP6V0D2Q8N8Y2 350 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 GPR150Q8NGU9 434 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 RHEBL1Q8TAI7 183 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 TFAP2CQ92754 450 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 IGSF8Q969P0 613 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 TUBGCP3Q96CW5 907 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
BRCC3-201ENST00000330045 SEMA3CQ99985 751 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 TIMMDC1Q9NPL8 285 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 EGFL7Q9UHF1 273 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 PHF24Q9UPV7 400 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 TANC1Q9C0D5 1861 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 IGLV3-10A0A075B6K4 115 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 DHRS12A0PJE2 317 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms