RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TSPAN33Q86UF1 283 aa23.24■■□□□ 1.31
TMEM54-201ENST00000329151 VASH2Q86V25 355 aa23.24■■□□□ 1.31
TMEM54-201ENST00000329151 GALNT13Q8IUC8 556 aa23.24■■□□□ 1.31
TMEM54-201ENST00000329151 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.24■■□□□ 1.31
TMEM54-201ENST00000329151 OR2M4Q96R27 311 aa23.24■■□□□ 1.31
TMEM54-201ENST00000329151 MCCC1Q96RQ3 725 aaPredicted RBP23.24■■□□□ 1.31
TMEM54-201ENST00000329151 DPYSL5Q9BPU6 564 aa23.24■■□□□ 1.31
TMEM54-201ENST00000329151 NUP85Q9BW27 656 aa23.24■■□□□ 1.31
TMEM54-201ENST00000329151 KCNK4Q9NYG8 393 aa23.24■■□□□ 1.31
TMEM54-201ENST00000329151 RCOR3Q9P2K3 495 aaPredicted RBP23.24■■□□□ 1.31
TMEM54-201ENST00000329151 TENM4Q6N022 2769 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 STMND1H3BQB6 276 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 MYO1FO00160 1098 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 B4GAT1O43505 415 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 ASMTLO95671 621 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 PEX11BO96011 259 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 SFTPCP11686 197 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 ZNF30P17039 623 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 CES1P23141 567 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 GJC1P36383 396 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 POLD2P49005 469 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 DPTQ07507 201 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 NFATC3Q12968 1075 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 C16orf72Q14CZ0 275 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 ZFYVE27Q5T4F4 411 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 LRRC66Q68CR7 880 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 NRROSQ86YC3 692 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 RCBTB1Q8NDN9 531 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 EXTL1Q92935 676 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 CCDC74BQ96LY2 380 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 NUDT22Q9BRQ3 303 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 B3GNT4Q9C0J1 378 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 STN1Q9H668 368 aaKnown RBP23.23■■□□□ 1.31
TMEM54-201ENST00000329151 FOXJ2Q9P0K8 574 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 SLC17A4Q9Y2C5 497 aa23.23■■□□□ 1.31
TMEM54-201ENST00000329151 TCF4P15884 667 aa23.22■■□□□ 1.31
TMEM54-201ENST00000329151 TRA2AQ13595 282 aaKnown RBP eCLIP23.22■■□□□ 1.31
TMEM54-201ENST00000329151 ADAMTSL4Q6UY14 1074 aa23.22■■□□□ 1.31
TMEM54-201ENST00000329151 MARK2Q7KZI7 788 aaKnown RBP23.22■■□□□ 1.31
TMEM54-201ENST00000329151 ZNF438Q7Z4V0 828 aa23.22■■□□□ 1.31
TMEM54-201ENST00000329151 NIPA2Q8N8Q9 360 aa23.22■■□□□ 1.31
TMEM54-201ENST00000329151 NAP1L5Q96NT1 182 aaPredicted RBP23.22■■□□□ 1.31
TMEM54-201ENST00000329151 THAP2Q9H0W7 228 aa23.22■■□□□ 1.31
TMEM54-201ENST00000329151 TMEM63CQ9P1W3 806 aa23.22■■□□□ 1.31
TMEM54-201ENST00000329151 FIGNQ5HY92 759 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 TMPRSS9Q7Z410 1059 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 C17orf82Q86X59 251 aaPredicted RBP23.21■■□□□ 1.31
TMEM54-201ENST00000329151 AGBL5Q8NDL9 886 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 PATE1Q8WXA2 126 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 BTBD6Q96KE9 485 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 TAAR9Q96RI9 348 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 SLC38A3Q99624 504 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 ABCG8Q9H221 673 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 TMEM98Q9Y2Y6 226 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 PCDHGA4Q9Y5G9 962 aa23.21■■□□□ 1.31
TMEM54-201ENST00000329151 IGHV5-10-1A0A0J9YXX1 117 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 C9orf172C9J069 976 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 SERPING1P05155 500 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 SLC25A11Q02978 314 aaKnown RBP23.2■■□□□ 1.3
TMEM54-201ENST00000329151 KCNC4Q03721 635 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 LRP8Q14114 963 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 NR1D2Q14995 579 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 CAVIN1Q6NZI2 390 aaKnown RBP23.2■■□□□ 1.3
TMEM54-201ENST00000329151 TECPR1Q7Z6L1 1165 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 MAP7D3Q8IWC1 876 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 NAGSQ8N159 534 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 IL22RA1Q8N6P7 574 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 KCTD6Q8NC69 237 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 OR4D9Q8NGE8 314 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 OR10G6Q8NH81 332 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 EXD1Q8NHP7 514 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 PIH1D2Q8WWB5 315 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 JPH3Q8WXH2 748 aaPredicted RBP23.2■■□□□ 1.3
TMEM54-201ENST00000329151 RBM22Q9NW64 420 aaKnown RBP eCLIP23.2■■□□□ 1.3
TMEM54-201ENST00000329151 PPIL1Q9Y3C6 166 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 MYO18BQ8IUG5 2567 aa23.2■■□□□ 1.3
TMEM54-201ENST00000329151 SDK2Q58EX2 2172 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 A0A0J9YYE9 177 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 INPP4BO15327 924 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 TRBC1P01850 177 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 PDHA1P08559 390 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 CCL4P13236 92 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 CD1CP29017 333 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 GARSP41250 739 aaKnown RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 NOP2P46087 812 aaKnown RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 LIMK2P53671 638 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 GPLD1P80108 840 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 SRSF6Q13247 344 aaKnown RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 NR1I3Q14994 352 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 IFI16Q16666 785 aaKnown RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 NKAIN2Q5VXU1 208 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 TXNRD3NBQ6F5E7 133 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 ZNF765Q7L2R6 523 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 TRIM74Q86UV6 250 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 FAM129CQ86XR2 697 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 NRSN1Q8IZ57 195 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 CBARPQ8N350 705 aaPredicted RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 SYN2Q92777 582 aaPredicted RBP23.19■■□□□ 1.3
TMEM54-201ENST00000329151 SCAMP4Q969E2 229 aa23.19■■□□□ 1.3
TMEM54-201ENST00000329151 IQCDQ96DY2 449 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms