RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SVOPQ8N4V2 548 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF781Q8N8C0 355 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 DYNC2LI1Q8TCX1 351 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 RSAD2Q8WXG1 361 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ELMO1Q92556 727 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 PBXIP1Q96AQ6 731 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 BDH2Q9BUT1 245 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 MRPL40Q9NQ50 206 aaKnown RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 SNX15Q9NRS6 342 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 CNTN6Q9UQ52 1028 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 SAGE2PA6NJ88 616 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 WNT10BO00744 389 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TRDMT1O14717 391 aaKnown RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 NCAM2O15394 837 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 AKR7A2O43488 359 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 HTR1AP08908 422 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TCF4P15884 667 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ACO1P21399 889 aaKnown RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 SHMT2P34897 504 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 MAGEA11P43364 429 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 NUMBP49757 651 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 SNRPD2P62316 118 aaKnown RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 GALEQ14376 348 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 PCLAFQ15004 111 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 WDR44Q5JSH3 913 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 R3HCC1LQ7Z5L2 792 aaKnown RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 PHC2Q8IXK0 858 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ACTL9Q8TC94 416 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ACER1Q8TDN7 264 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ZBED3Q96IU2 234 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 CDADC1Q9BWV3 514 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 EFCAB1Q9HAE3 211 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 EVA1BQ9NVM1 165 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 GMPR2Q9P2T1 348 aaKnown RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TMPRSS11EQ9UL52 423 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TBX20Q9UMR3 447 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 AURKCQ9UQB9 309 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TMX2Q9Y320 296 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 KCNE2Q9Y6J6 123 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TCRBV5S1A1TA0A578 114 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 HMX2A2RU54 273 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 HOXB3P14651 431 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 PRKCHP24723 683 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 GNA15P30679 374 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 TGFBR1P36897 503 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 GABRB2P47870 512 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 PSME3P61289 254 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 CLDN10P78369 228 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 N4BP2L1Q5TBK1 243 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 TMEM198Q66K66 360 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 RAP1GAP2Q684P5 730 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SLC7A14Q8TBB6 771 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 DEDD2Q8WXF8 326 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 MUL1Q969V5 352 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 CNDP1Q96KN2 507 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 MUS81Q96NY9 551 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SLIRPQ9GZT3 109 aaKnown RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 ZNF556Q9HAH1 456 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SMYD2Q9NRG4 433 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 IARS2Q9NSE4 1012 aaKnown RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 CACNG2Q9Y698 323 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 DICER1Q9UPY3 1922 aaKnown RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 CIB4A0PJX0 185 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 CHADO15335 359 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SLC16A4O15374 487 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 GABARAPO95166 117 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 IFNA14P01570 189 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 IL7RP16871 459 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 KELP23276 732 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 NCS1P62166 190 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 RPL7AP62424 266 aaKnown RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 ATP6AP1Q15904 470 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 PARP15Q460N3 678 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SYCE2Q6PIF2 218 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 USP51Q70EK9 711 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 TAGAPQ8N103 731 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 KIFC1Q9BW19 673 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SLC6A17Q9H1V8 727 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 NMRK2Q9NPI5 230 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 INTS7Q9NVH2 962 aaKnown RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 POLR3BQ9NW08 1133 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SMPD3Q9NY59 655 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 TAS2R9Q9NYW1 312 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SAE1Q9UBE0 346 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 PGAP2Q9UHJ9 254 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 TLK1Q9UKI8 766 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 PNMA8BQ9ULN7 279 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 SCML1Q9UN30 329 aa11.83□□□□□ -0.52
SHMT2-201ENST00000328923 MAGED2Q9UNF1 606 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-201ENST00000328923 PRORSD1PA6NEY8 169 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 LSM8O95777 96 aaKnown RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 CSH1P0DML2 217 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 CSH2P0DML3 217 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TAL1P17542 331 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 AXLP30530 894 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms