RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TEAD4Q15561 434 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 ATP13A5Q4VNC0 1218 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 ZCCHC23Q6ZST2 131 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 RTKNQ9BST9 563 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 C16orf70Q9BSU1 422 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TRIT1Q9H3H1 467 aaKnown RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CCDC167Q9P0B6 97 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 EVLQ9UI08 416 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 SPTLC1O15269 473 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 PFKLP17858 780 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CUZD1Q86UP6 607 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 SLC44A2Q8IWA5 706 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 MIOSQ9NXC5 875 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 MAGEL2Q9UJ55 1249 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 A0A0U1RQJ8 604 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CCDC85CA6NKD9 419 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TPST1O60507 370 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 COPZ1P61923 177 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 PAFAH1B3Q15102 231 aaKnown RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 INO80DQ53TQ3 878 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 BRAT1Q6PJG6 821 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 GALNT13Q8IUC8 556 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 SAMD14Q8IZD0 417 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CFAP52Q8N1V2 620 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 AP2M1Q96CW1 435 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 NDNQ99608 321 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 SOHLH2Q9NX45 425 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 V9GYQ6 96 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3DA0A087WVF3 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3IA0A087WXS9 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3EA0A087X179 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3KA0A087X1G2 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3FA6NER0 549 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3LB9A6J9 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 PDE5AO76074 875 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3HP0C7X1 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 CCND3P30281 292 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 PSME3P61289 254 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3GQ6DHY5 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3CQ6IPX1 549 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 RHBDF2Q6PJF5 856 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 AGMOQ6ZNB7 445 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TBC1D3Q8IZP1 549 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF614Q8N883 585 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 ARL14EPQ8N8R7 260 aaPredicted RBP11.39□□□□□ -0.59
COL4A5-201ENST00000328300 C1orf74Q96LT6 269 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 C3orf14Q9HBI5 128 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 NDOR1Q9UHB4 597 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 TRAF6Q9Y4K3 522 aa11.39□□□□□ -0.59
COL4A5-201ENST00000328300 SERPINB7O75635 380 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 ATP6V1B1P15313 513 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 DRD4P21917 467 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 TTKP33981 857 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 BLKP51451 505 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 LPIN1Q14693 890 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 IYDQ6PHW0 289 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 PRSS55Q6UWB4 352 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-201ENST00000328300 DNAJB7Q7Z6W7 309 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-201ENST00000328300 ZDHHC13Q8IUH4 622 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 NATD1Q8N6N6 113 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 MRM3Q9HC36 420 aaKnown RBP11.38□□□□□ -0.59
COL4A5-201ENST00000328300 DTLQ9NZJ0 730 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 LRCH1Q9Y2L9 728 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 INPP4BO15327 924 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 STK16O75716 305 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF30P17039 623 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 DSC2Q02487 901 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 TTC23Q5W5X9 447 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 FAM92BQ6ZTR7 304 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 OTOP3Q7RTS5 596 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 DDHD1Q8NEL9 900 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF461Q8TAF7 563 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 EXOSC4Q9NPD3 245 aaKnown RBP11.38□□□□□ -0.59
COL4A5-201ENST00000328300 CACNA2D2Q9NY47 1150 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 COPG2Q9UBF2 871 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 TRPS1Q9UHF7 1281 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 PEX10O60683 326 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 WFS1O76024 890 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 EPHX1P07099 455 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 NDUFS1P28331 727 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 USP4Q13107 963 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 DEPDC1Q5TB30 811 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 MSANTD2Q6P1R3 559 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 DUSP12Q9UNI6 340 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 CRELD2Q6UXH1 353 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-201ENST00000328300 SNX20Q7Z614 316 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 RBM23Q86U06 439 aaKnown RBP11.38□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF276Q8N554 614 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 ZFYVE19Q96K21 471 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 EXOC2Q96KP1 924 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF607Q96SK3 696 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 UNKQ9C0B0 810 aaKnown RBP11.38□□□□□ -0.59
COL4A5-201ENST00000328300 MINDY3Q9H8M7 445 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 TK2O00142 265 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 TNFAIP8O95379 198 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms