RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 USP22Q9UPT9 525 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 NAALAD2Q9Y3Q0 740 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 MAGED1Q9Y5V3 778 aaPredicted RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 PTGDR2Q9Y5Y4 395 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 OAS3Q9Y6K5 1087 aaKnown RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 V9GYQ6 96 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SBF1O95248 1867 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ANKRD12Q6UB98 2062 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 TSC2P49815 1807 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 PHIPQ8WWQ0 1821 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 IGKV6-21A0A0C4DH24 114 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 ZBTB42B2RXF5 422 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 NDUFS2O75306 463 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 PRSS23O95084 383 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 NADKO95544 446 aaPredicted RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 CHEK2O96017 543 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 HRH2P25021 359 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 CD40LGP29965 261 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 SERPINB1P30740 379 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 TKTL1P51854 596 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 GRB7Q14451 532 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 CRY1Q16526 586 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 CARTPTQ16568 116 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 HIST2H2ACQ16777 129 aaPredicted RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 MEP1AQ16819 746 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 USP43Q70EL4 1123 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 GALNT13Q8IUC8 556 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 PHYKPLQ8IUZ5 450 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 DNAJB14Q8TBM8 379 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 KCTD14Q9BQ13 255 aaPredicted RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 TRIM54Q9BYV2 358 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 TOR3AQ9H497 397 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 SP140LQ9H930 580 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 MOV10Q9HCE1 1003 aaKnown RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 PAK1IP1Q9NWT1 392 aaPredicted RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF229Q9UJW7 825 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 PCDHB3Q9Y5E6 796 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 SPO11Q9Y5K1 396 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 THSD7AQ9UPZ6 1657 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 SRCAPQ6ZRS2 3230 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 EEF2KO00418 725 aaKnown RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 MGEA5O60502 916 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 DNAJB5O75953 348 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 MATN4O95460 622 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 CYP2C8P10632 490 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 UBA1P22314 1058 aaKnown RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 MATKP42679 507 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 RBP5P82980 135 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 TMEM132DQ14C87 1099 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 SLC25A52Q3SY17 297 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 COQ5Q5HYK3 327 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 CATSPEREQ5SY80 951 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 RBM20Q5T481 1227 aaKnown RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 TMEM236Q5W0B7 351 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 RNF135Q8IUD6 432 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 DEFB106AQ8N104 65 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 RNF145Q96MT1 663 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 ASB7Q9H672 318 aa12.76□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF214Q9UL59 606 aaPredicted RBP12.76□□□□□ -0.37
CCDC60-201ENST00000327554 DICER1Q9UPY3 1922 aaKnown RBP12.75□□□□□ -0.37
CCDC60-201ENST00000327554 ILVBLA1L0T0 632 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 ASPDHA6ND91 283 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 TTC34A8MYJ7 566 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 FAM72CH0Y354 149 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 SLC22A1O15245 554 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 HUS1O60921 280 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 GUCY1B2O75343 617 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 S100BP04271 92 aaPredicted RBP12.75□□□□□ -0.37
CCDC60-201ENST00000327554 NTRK1P04629 796 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 AGXTP21549 392 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 RPL34P49207 117 aaKnown RBP12.75□□□□□ -0.37
CCDC60-201ENST00000327554 LAMC2Q13753 1193 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 FAM72AQ5TYM5 149 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 FKBP1CQ5VVH2 108 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 FAM72DQ6L9T8 149 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 ESRP1Q6NXG1 681 aaKnown RBP12.75□□□□□ -0.37
CCDC60-201ENST00000327554 FAM72BQ86X60 149 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 LACC1Q8IV20 430 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 DCP1BQ8IZD4 617 aaKnown RBP12.75□□□□□ -0.37
CCDC60-201ENST00000327554 ELMOD1Q8N336 334 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 NPWQ8N729 165 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 GABPB2Q8TAK5 448 aaPredicted RBP12.75□□□□□ -0.37
CCDC60-201ENST00000327554 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 PHF10Q8WUB8 498 aaKnown RBP12.75□□□□□ -0.37
CCDC60-201ENST00000327554 TMBIM1Q969X1 311 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 TP53INP1Q96A56 240 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 MBOAT4Q96T53 435 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 BCL7BQ9BQE9 202 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 FAM118AQ9NWS6 357 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 DPP3Q9NY33 737 aa12.75□□□□□ -0.37
CCDC60-201ENST00000327554 SYNJ2BP-COX16A0A087WUM0 186 aa12.74□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF99A8MXY4 864 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms