RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 GAPDHSO14556 408 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-201ENST00000320054 WNT9AO14904 365 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 MMP20O60882 483 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 TCEA3O75764 348 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 PCDH8O95206 1070 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 GOT2P00505 430 aaKnown RBP13.56□□□□□ -0.24
PRPF18-201ENST00000320054 EIF3BP55884 814 aaKnown RBP13.56□□□□□ -0.24
PRPF18-201ENST00000320054 PEX6Q13608 980 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 THOC5Q13769 683 aaKnown RBP13.56□□□□□ -0.24
PRPF18-201ENST00000320054 ACOX1Q15067 660 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 TMEM259Q4ZIN3 620 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 ALS2CLQ60I27 953 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 NEPROQ6NW34 567 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 Q6ZVL8 140 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 CNTN4Q8IWV2 1026 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 UNC5BQ8IZJ1 945 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 GPR26Q8NDV2 337 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 OR2T34Q8NGX1 318 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 OR6P1Q8NGX9 317 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 OR4L1Q8NH43 312 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 CDKL2Q92772 493 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 C1QTNF2Q9BXJ5 285 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 FAM83DQ9H4H8 585 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 VIPAS39Q9H9C1 493 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 PPCSQ9HAB8 311 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 IL26Q9NPH9 171 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 PRMT8Q9NR22 394 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-201ENST00000320054 SPATA6Q9NWH7 488 aaPredicted RBP13.56□□□□□ -0.24
PRPF18-201ENST00000320054 NSMCE4AQ9NXX6 385 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 VPS18Q9P253 973 aa13.56□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3DA0A087WVF3 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3IA0A087WXS9 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3EA0A087X179 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3KA0A087X1G2 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3FA6NER0 549 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 AGAP14A8MT82 685 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3LB9A6J9 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 CCL22O00626 93 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 CD3EAPO15446 510 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 LZTS3O60299 673 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 RNGTTO60942 597 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TM7SF2O76062 418 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 RECQL5O94762 991 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3HP0C7X1 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 ERVK-10P10266 1014 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 MC4RP32245 332 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 FOXN2P32314 431 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 ACSL1P33121 698 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 ETV3P41162 512 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 CACNG1Q06432 222 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 DPTQ07507 201 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 KBTBD12Q3ZCT8 623 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 GPR33Q49SQ1 333 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 HSP90AA5PQ58FG0 334 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 HENMT1Q5T8I9 393 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TEDDM1Q5T9Z0 273 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3GQ6DHY5 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3CQ6IPX1 549 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 MRNIPQ6NTE8 343 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 LRIG3Q6UXM1 1119 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 RFLNAQ6ZTI6 216 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 KIAA0408Q6ZU52 694 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 MARK2Q7KZI7 788 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 GALNT7Q86SF2 657 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 FAM124AQ86V42 546 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 SLC26A11Q86WA9 606 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 HORMAD1Q86X24 394 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TBC1D3Q8IZP1 549 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 TMEM109Q9BVC6 243 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 ABCG8Q9H221 673 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 SUDS3Q9H7L9 328 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 CD93Q9NPY3 652 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 PPANQ9NQ55 473 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 SMYD2Q9NRG4 433 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 CATSPERZQ9NTU4 200 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 WSB2Q9NYS7 404 aaPredicted RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 ZFATQ9P243 1243 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 ZFR2Q9UPR6 939 aaKnown RBP13.55□□□□□ -0.24
PRPF18-201ENST00000320054 PLAAQ9Y263 795 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 NFS1Q9Y697 457 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 SLC30A1Q9Y6M5 507 aa13.55□□□□□ -0.24
PRPF18-201ENST00000320054 IGHV1OR15-9A0A0B4J2B8 117 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 TRBV5-4A0A0C4DH59 114 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 EXOC1LA0A1B0GW35 172 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 A0A1W2PQU0 124 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 IGLON5A6NGN9 336 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 CXorf49A8MYA2 514 aaPredicted RBP13.54□□□□□ -0.24
PRPF18-201ENST00000320054 MAP2K7O14733 419 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 AXIN1O15169 862 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ATP8B1O43520 1251 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 PRAMEF1O95521 474 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 SEMA4FO95754 770 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 SHBGP04278 402 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 IVLP07476 585 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 ITGALP20701 1170 aa13.54□□□□□ -0.24
PRPF18-201ENST00000320054 OGNP20774 298 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms