RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 TLR6Q9Y2C9 796 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 PCDHB1Q9Y5F3 818 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 PPEF2O14830 753 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 TMEM164Q5U3C3 297 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 RNF19BQ6ZMZ0 732 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 LRRC74BQ6ZQY2 392 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 ZBTB2Q8N680 514 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 CD101Q93033 1021 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 PMEPA1Q969W9 287 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 PTPN18Q99952 460 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 NCDNQ9UBB6 729 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
RFFL-201ENST00000315249 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.47□□□□□ -0.25
RFFL-201ENST00000315249 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.47□□□□□ -0.25
RFFL-201ENST00000315249 ATP6AP2A0A1C7CYW4 349 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 PIPSLA2A3N6 862 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 ATP6AP2O75787 350 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 JAK1P23458 1154 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
RFFL-201ENST00000315249 SLC30A9Q6PML9 568 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 CLEC20AQ6ZU45 233 aa13.47□□□□□ -0.25
RFFL-201ENST00000315249 TYRP14679 529 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 CCNCP24863 283 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 RPL4P36578 427 aaKnown RBP13.46□□□□□ -0.25
RFFL-201ENST00000315249 ASPAP45381 313 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.25
RFFL-201ENST00000315249 CAVIN3Q969G5 261 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 OLFM3Q96PB7 478 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 DNAJB4Q9UDY4 337 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 INSL5Q9Y5Q6 135 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 GRIN2DO15399 1336 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 ADSSP30520 456 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 CDH13P55290 713 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 PACS1Q6VY07 963 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 SNX32Q86XE0 403 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 RTL3Q8N8U3 475 aaKnown RBP13.46□□□□□ -0.25
RFFL-201ENST00000315249 ACTRT2Q8TDY3 377 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 SAC3D1A6NKF1 404 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 OR1F1O43749 312 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 SLC28A2O43868 658 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 MAN1A2O60476 641 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 TNFP01375 233 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 UBTFL6P0CB48 400 aaPredicted RBP13.46□□□□□ -0.25
RFFL-201ENST00000315249 ADGRF1Q5T601 910 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 GDPD4Q6W3E5 623 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 ZNF248Q8NDW4 579 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 ITFG1Q8TB96 612 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 PPP3R2Q96LZ3 170 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 FBXL18Q96ME1 805 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 SAMD11Q96NU1 681 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 VPS4AQ9UN37 437 aa13.46□□□□□ -0.25
RFFL-201ENST00000315249 PKMP14618 531 aaKnown RBP13.46□□□□□ -0.26
RFFL-201ENST00000315249 AP1S1P61966 158 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 CARD16Q5EG05 197 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 SERPINA9Q86WD7 417 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 PLD5Q8N7P1 536 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 NUS1Q96E22 293 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 ST6GALNAC4Q9H4F1 302 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 GGA2Q9UJY4 613 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.26
RFFL-201ENST00000315249 MATN3O15232 486 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 PRELID2Q8N945 189 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 OR4A15Q8NGL6 344 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 FBXO30Q8TB52 745 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 SNX15Q9NRS6 342 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 PCYOX1Q9UHG3 505 aa13.46□□□□□ -0.26
RFFL-201ENST00000315249 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 FASP25445 335 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 ACTR1BP42025 376 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 ACTR1AP61163 376 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 CCNYL2Q5T2Q4 361 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 TXNDC11Q6PKC3 985 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 TTC29Q8NA56 475 aaPredicted RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 CHRAC1Q9NRG0 131 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 COG5Q9UP83 839 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 MYADML2A6NDP7 307 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 ATP6V0D1P61421 351 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 IL10RBQ08334 325 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 C1DQ13901 141 aaKnown RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 DPYSL5Q9BPU6 564 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 XPR1Q9UBH6 696 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 FZD10Q9ULW2 581 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 MTF2Q9Y483 593 aaPredicted RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 CLDN4O14493 209 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 SOD2P04179 222 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 RPL3P39023 403 aaKnown RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 NFATC2Q13469 925 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 FBXO48Q5FWF7 155 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 CMC1Q7Z7K0 106 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 AHI1Q8N157 1196 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 PPCDCQ96CD2 204 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 ACE2Q9BYF1 805 aaPredicted RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 TMEM216Q9P0N5 145 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 CSNK2BP67870 215 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 ZBTB49Q6ZSB9 765 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 R3HCC1LQ7Z5L2 792 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms