RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 B4GALNT2Q8NHY0 566 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 CCDC97Q96F63 343 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 LENG8Q96PV6 779 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 MMADHCQ9H3L0 296 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 VPS51Q9UID3 782 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 TBC1D30Q9Y2I9 924 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 ATP6AP2A0A1C7CYW4 349 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 NCF1BA6NI72 391 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 NCF1CA8MVU1 366 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 ATP6AP2O75787 350 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 SUPT7LO94864 414 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 MYL4P12829 197 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 NCF1P14598 390 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 ALOX15P16050 662 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 COPAP53621 1224 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 MRNIPQ6NTE8 343 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 ISCA2Q86U28 154 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 ULK2Q8IYT8 1036 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 OVCA2Q8WZ82 227 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 UBXN10Q96LJ8 280 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 ECSITQ9BQ95 431 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 TNKS2Q9H2K2 1166 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 RC3H2Q9HBD1 1191 aaKnown RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 SARS2Q9NP81 518 aaKnown RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 POLR3BQ9NW08 1133 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 CFAP97Q9P2B7 532 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 SLC7A8Q9UHI5 535 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 MID2Q9UJV3 735 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 IQCF5A8MTL0 148 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 AIM2O14862 343 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 ATP5F1P24539 256 aaPredicted RBP12.4□□□□□ -0.42
RNF4-201ENST00000314289 CPOXP36551 454 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 CNPY1Q3B7I2 92 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 KLC3Q6P597 504 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 RDH11Q8TC12 318 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 ZNF599Q96NL3 588 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 CORO1BQ9BR76 489 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 SSX2IPQ9Y2D8 614 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 MYO9BQ13459 2157 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 ABHD14A-ACY1A0A1B0GW23 586 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 ANKRD66B4E2M5 251 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 UBXN8O00124 270 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 CCL16O15467 120 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 GREM1O60565 184 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 IPO13O94829 963 aaKnown RBP12.4□□□□□ -0.42
RNF4-201ENST00000314289 MSX2P35548 267 aaPredicted RBP12.4□□□□□ -0.42
RNF4-201ENST00000314289 RANBP1P43487 201 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 AP2B1P63010 937 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 TNK2Q07912 1038 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 CDC16Q13042 620 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 PRKAA1Q13131 559 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 PPP1R3AQ16821 1122 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 ZRANB3Q5FWF4 1079 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 PAQR3Q6TCH7 311 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 DDX53Q86TM3 631 aaKnown RBP12.4□□□□□ -0.42
RNF4-201ENST00000314289 SETD3Q86TU7 594 aaPredicted RBP12.4□□□□□ -0.42
RNF4-201ENST00000314289 KDM1BQ8NB78 822 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 EZH1Q92800 747 aaPredicted RBP12.4□□□□□ -0.42
RNF4-201ENST00000314289 ESAMQ96AP7 390 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 SLC30A3Q99726 388 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 IKZF3Q9UKT9 509 aa12.4□□□□□ -0.42
RNF4-201ENST00000314289 PARNO95453 639 aaKnown RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 CRTAMO95727 393 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 EPOP01588 193 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 LAG3P18627 525 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ZNF140P52738 457 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 STC1P52823 247 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 KLF10Q13118 480 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 PDAP1Q13442 181 aaKnown RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 OR4D1Q15615 310 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 FAM91A1Q658Y4 838 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ARHGAP22Q7Z5H3 698 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 TCEAL8Q8IYN2 117 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 DEFB107AQ8IZN7 70 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 KLHL23Q8NBE8 558 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 PYDC1Q8WXC3 89 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 TRMT2BQ96GJ1 504 aaKnown RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 SIKE1Q9BRV8 207 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 CRISPLD2Q9H0B8 497 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 EBF3Q9H4W6 596 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 CXXC1Q9P0U4 656 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 EVLQ9UI08 416 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 CCL26Q9Y258 94 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 PTGDR2Q9Y5Y4 395 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 UBFD1O14562 309 aaKnown RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 RNASEH1O60930 286 aaKnown RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 RHOBTB1O94844 696 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 PYGLP06737 847 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 MC4RP32245 332 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 RAP1GDS1P52306 607 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 C1QTNF8P60827 252 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 GSTA3Q16772 222 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 PFKFB4Q16877 469 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 TCHHL1Q5QJ38 904 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 TAS2R42Q7RTR8 314 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 TSPAN17Q96FV3 270 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms