RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 OR2AP1Q8NGE2 309 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 LZICQ8WZA0 190 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 IGSF8Q969P0 613 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CDKN2AIPNLQ96HQ2 116 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 SH3GL1Q99961 368 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 DCLRE1BQ9H816 532 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 MIEF1Q9NQG6 463 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CD84Q9UIB8 345 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 TK2O00142 265 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 LEFTY2O00292 366 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 NAA20P61599 178 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 DEFB103AP81534 67 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CYP2A13Q16696 494 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CYP51A1Q16850 503 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 TRMT5Q32P41 509 aaKnown RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 DNAJC14Q6Y2X3 702 aaPredicted RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 UMODL1-AS1Q8N2C9 162 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 WFIKKN2Q8TEU8 576 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 PIF1Q9H611 641 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 ANLNQ9NQW6 1124 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CLDND1Q9NY35 253 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 GGA2Q9UJY4 613 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 BTRCQ9Y297 605 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 SBF2Q86WG5 1849 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 ASLP04424 464 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CNPP09543 421 aaKnown RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 CTSEP14091 401 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 FGFR3P22607 806 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 DSC3Q14574 896 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 ZNF460Q14592 562 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 RIPOR1Q6ZS17 1223 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 MARK4Q96L34 752 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 CORO1CQ9ULV4 474 aaPredicted RBP13.65□□□□□ -0.22
DDX54-202ENST00000314045 TRAF6Q9Y4K3 522 aa13.65□□□□□ -0.22
DDX54-202ENST00000314045 OTCP00480 354 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 OGNP20774 298 aaKnown RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 RGL4Q8IZJ4 473 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 DCAF4L2Q8NA75 395 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 BPIFB1Q8TDL5 484 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 CASD1Q96PB1 797 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 CDRT15Q96T59 188 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 GATA5Q9BWX5 397 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 C2orf78A6NCI8 922 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 MYO1GB0I1T2 1018 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 RHOP08100 348 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 HGFP14210 728 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 HTR1BP28222 390 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 BMPR1AP36894 532 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 PTGER3P43115 390 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 CACNA2D1P54289 1103 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 MED21Q13503 144 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 UBE2R2Q712K3 238 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 SCD5Q86SK9 330 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 FSTL5Q8N475 847 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 SEC14L1Q92503 715 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 JADE3Q92613 823 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 CENPIQ92674 756 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 INPP5DQ92835 1189 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 POLR3BQ9NW08 1133 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 THEGQ9P2T0 379 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 HCSTQ9UBK5 93 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 GPSM3Q9Y4H4 160 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 SPACA6W5XKT8 324 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 NPEPPSL1A6NEC2 478 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 KDELR3O43731 214 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 STC2O76061 302 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 ESR1P03372 595 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 PRKCGP05129 697 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 TYRP14679 529 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 MPSTP25325 297 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 ALDH9A1P49189 494 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 DPYSQ14117 519 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 PDE1CQ14123 709 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 ARL13AQ5H913 290 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 PAGE2BQ5JRK9 111 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 PIK3R6Q5UE93 754 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 CAND1Q86VP6 1230 aaKnown RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 ARFGAP1Q8N6T3 406 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 ZNF366Q8N895 744 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 OSBPL1AQ9BXW6 950 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 NENFQ9UMX5 172 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 SNX6Q9UNH7 406 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 KCNE2Q9Y6J6 123 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 COL11A2P13942 1736 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 TRAFD1O14545 582 aaPredicted RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 UNC5CO95185 931 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 PSMA4P25789 261 aaKnown RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 WDR4P57081 412 aaKnown RBP13.64□□□□□ -0.23
DDX54-202ENST00000314045 Q6ZVU0 165 aa13.64□□□□□ -0.23
DDX54-202ENST00000314045 CUZD1Q86UP6 607 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms