RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 USP29Q9HBJ7 922 aa20.75■□□□□ 0.91
MRPL39-201ENST00000307301 CYP4F12Q9HCS2 524 aa20.75■□□□□ 0.91
MRPL39-201ENST00000307301 GUCA1BQ9UMX6 200 aa20.75■□□□□ 0.91
MRPL39-201ENST00000307301 DOLKQ9UPQ8 538 aa20.75■□□□□ 0.91
MRPL39-201ENST00000307301 GOLGA4Q13439 2230 aaKnown RBP20.75■□□□□ 0.91
MRPL39-201ENST00000307301 KRT86O43790 486 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 TJP3O95049 919 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 PROS1P07225 676 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 DUSP3P51452 185 aaPredicted RBP20.74■□□□□ 0.91
MRPL39-201ENST00000307301 EIF3EP60228 445 aaKnown RBP20.74■□□□□ 0.91
MRPL39-201ENST00000307301 HES3Q5TGS1 186 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 KDELC1Q6UW63 502 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 TMPRSS12Q86WS5 348 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 GKN2Q86XP6 184 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 SLC35F3Q8IY50 421 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 CCHCR1Q8TD31 782 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 HES6Q96HZ4 224 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 RIOK2Q9BVS4 552 aaKnown RBP20.74■□□□□ 0.91
MRPL39-201ENST00000307301 FRMD8Q9BZ67 464 aaPredicted RBP20.74■□□□□ 0.91
MRPL39-201ENST00000307301 EVA1BQ9NVM1 165 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 FAM153AQ9UHL3 310 aa20.74■□□□□ 0.91
MRPL39-201ENST00000307301 TPRP12270 2363 aaKnown RBP20.74■□□□□ 0.91
MRPL39-201ENST00000307301 NDST3O95803 873 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 FUCA1P04066 466 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 CEACAM5P06731 702 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 RBP3P10745 1247 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 SPINT3P49223 89 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 WNT3AP56704 352 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 INSM1Q01101 510 aaPredicted RBP20.73■□□□□ 0.91
MRPL39-201ENST00000307301 NR0B2Q15466 257 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 GUSBP11Q6P575 273 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 ADAMTSL4Q6UY14 1074 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 TRIM74Q86UV6 250 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 NLRP8Q86W28 1048 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 CDKL3Q8IVW4 592 aaPredicted RBP20.73■□□□□ 0.91
MRPL39-201ENST00000307301 LRRC8AQ8IWT6 810 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 RAVER1Q8IY67 606 aaKnown RBP20.73■□□□□ 0.91
MRPL39-201ENST00000307301 SDR16C5Q8N3Y7 309 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 IFI44Q8TCB0 444 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 PTCD2Q8WV60 388 aaKnown RBP20.73■□□□□ 0.91
MRPL39-201ENST00000307301 EID2BQ96D98 161 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 OXNAD1Q96HP4 312 aaPredicted RBP20.73■□□□□ 0.91
MRPL39-201ENST00000307301 FCRL5Q96RD9 977 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 WDR24Q96S15 920 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 TMEM168Q9H0V1 697 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 SUDS3Q9H7L9 328 aaPredicted RBP20.73■□□□□ 0.91
MRPL39-201ENST00000307301 ZFYVE1Q9HBF4 777 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 MAGEE1Q9HCI5 957 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 PKD2L2Q9NZM6 624 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 NCKIPSDQ9NZQ3 722 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 RSPH14Q9UHP6 348 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 TRHDEQ9UKU6 1024 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 SHOC2Q9UQ13 582 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 ZNF711Q9Y462 761 aa20.73■□□□□ 0.91
MRPL39-201ENST00000307301 MAP1BP46821 2468 aaKnown RBP20.73■□□□□ 0.91
MRPL39-201ENST00000307301 CPED1A4D0V7 1026 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 SLC4A1P02730 911 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 POLD2P49005 469 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 E2F1Q01094 437 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 CCDC70Q6NSX1 233 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 DARS2Q6PI48 645 aaKnown RBP20.72■□□□□ 0.91
MRPL39-201ENST00000307301 DOK6Q6PKX4 331 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 LVRNQ6Q4G3 990 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 CCL4L1Q8NHW4 92 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 SCG3Q8WXD2 468 aaKnown RBP20.72■□□□□ 0.91
MRPL39-201ENST00000307301 GLMNQ92990 594 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 CARS2Q9HA77 564 aaKnown RBP20.72■□□□□ 0.91
MRPL39-201ENST00000307301 SIRPGQ9P1W8 387 aa20.72■□□□□ 0.91
MRPL39-201ENST00000307301 COL27A1Q8IZC6 1860 aaPredicted RBP20.71■□□□□ 0.91
MRPL39-201ENST00000307301 LOC285095A0A1B0GVY8 99 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 INPP4BO15327 924 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 PTMAP06454 111 aaKnown RBP20.71■□□□□ 0.91
MRPL39-201ENST00000307301 PYGLP06737 847 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 GP1BAP07359 652 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 JUPP14923 745 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 CCZ1BP86790 482 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 CCZ1P86791 482 aaPredicted RBP20.71■□□□□ 0.91
MRPL39-201ENST00000307301 ST3GAL2Q16842 350 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 HENMT1Q5T8I9 393 aaKnown RBP20.71■□□□□ 0.91
MRPL39-201ENST00000307301 EFL1Q7Z2Z2 1120 aaKnown RBP20.71■□□□□ 0.91
MRPL39-201ENST00000307301 TAF8Q7Z7C8 310 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 KYQ8NBH2 561 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 HIC2Q96JB3 615 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 MRGPRX2Q96LB1 330 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 GBA3Q9H227 469 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 FAM83DQ9H4H8 585 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 GULP1Q9UBP9 304 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 SUFUQ9UMX1 484 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 GPR34Q9UPC5 381 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 SLC17A4Q9Y2C5 497 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 TMEM98Q9Y2Y6 226 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 SPO11Q9Y5K1 396 aa20.71■□□□□ 0.91
MRPL39-201ENST00000307301 EME2A4GXA9 379 aaPredicted RBP20.7■□□□□ 0.9
MRPL39-201ENST00000307301 RGSL1A5PLK6 1076 aa20.7■□□□□ 0.9
MRPL39-201ENST00000307301 KCNN4O15554 427 aa20.7■□□□□ 0.9
MRPL39-201ENST00000307301 OPA1O60313 960 aa20.7■□□□□ 0.9
MRPL39-201ENST00000307301 CHRNA4P43681 627 aa20.7■□□□□ 0.9
MRPL39-201ENST00000307301 GNPDA1P46926 289 aa20.7■□□□□ 0.9
MRPL39-201ENST00000307301 RPIAP49247 311 aa20.7■□□□□ 0.9
MRPL39-201ENST00000307301 MPP3Q13368 585 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms