RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FADS2P1A8MWK0 482 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 LILRB5O75023 590 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 USP1O94782 785 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 PCDH8O95206 1070 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 CRTAMO95727 393 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 ELFN1P0C7U0 828 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 PGAM1P18669 254 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 XPAP23025 273 aaPredicted RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 CDKN1CP49918 316 aaPredicted RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 CCR5P51681 352 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 DCDC1P59894 354 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 RPS21P63220 83 aaKnown RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 TMPRSS15P98073 1019 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 DPTQ07507 201 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 CCDC15Q0P6D6 951 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 SEPT6Q14141 434 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 SEMA3AQ14563 771 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 CRYMQ14894 314 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 ANGPT1Q15389 498 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 ZNF528Q3MIS6 628 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 DNAJC21Q5F1R6 531 aaKnown RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 KIAA0895LQ68EN5 471 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 KIAA1161Q6NSJ0 714 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 CYS1Q717R9 158 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 CCDC25Q86WR0 208 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 PIANPQ8IYJ0 282 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 DTX3LQ8TDB6 740 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 CCDC97Q96F63 343 aaPredicted RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 BMFQ96LC9 184 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 FUT8Q9BYC5 575 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 SLC17A9Q9BYT1 436 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 MARCH4Q9P2E8 410 aaPredicted RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 MAD1L1Q9Y6D9 718 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.46□□□□□ -0.9
RFX3-201ENST00000302303 RPS6KL1Q9Y6S9 549 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 ZNF106Q9H2Y7 1883 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 FRYLO94915 3013 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 ABCA7Q8IZY2 2146 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 PLXNA2O75051 1894 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 TRBV5-4A0A0C4DH59 114 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 RGSL1A5PLK6 1076 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 PRR23AA6NEV1 266 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 CXorf49A8MYA2 514 aaPredicted RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 NEMP1O14524 444 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 STX7O15400 261 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 GALR2O43603 387 aaPredicted RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A9O60656 530 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 RPP40O75818 363 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 PIAS1O75925 651 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 TM7SF2O76062 418 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 TTC4O95801 387 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 SLC4A1P02730 911 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A6P19224 532 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A1P22309 533 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A4P22310 534 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 MAT2AP31153 395 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 FOXN2P32314 431 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A3P35503 534 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A5P35504 534 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 TRIM23P36406 574 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 TNNT3P45378 269 aaPredicted RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 SFSWAPQ12872 951 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 ARHGEF7Q14155 803 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 FRG1Q14331 258 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 ACOX1Q15067 660 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 CHRNA6Q15825 494 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 SKIDA1Q1XH10 827 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 USP39Q53GS9 565 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 KIAA0930Q6ICG6 404 aaPredicted RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 C3orf62Q6ZUJ4 267 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 ZNF765Q7L2R6 523 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 NLRP9Q7RTR0 991 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 NRSN1Q8IZ57 195 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 DEFB119Q8N690 84 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 PAF1Q8N7H5 531 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 TMEM145Q8NBT3 493 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 PPHLN1Q8NEY8 458 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 CADM4Q8NFZ8 388 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 CXorf40AQ8TE69 158 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 PYROXD1Q8WU10 500 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 CAVIN3Q969G5 261 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 ZNF669Q96BR6 464 aaPredicted RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 LENG8Q96PV6 779 aaPredicted RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 PLEKHG4BQ96PX9 1271 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 NAT9Q9BTE0 207 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 RIOK2Q9BVS4 552 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 DUSP15Q9H1R2 295 aaPredicted RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A7Q9HAW7 530 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A10Q9HAW8 530 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 UGT1A8Q9HAW9 530 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 FZD3Q9NPG1 666 aa9.45□□□□□ -0.9
RFX3-201ENST00000302303 MTRF1LQ9UGC7 380 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 ZC3H7BQ9UGR2 993 aaKnown RBP9.45□□□□□ -0.9
RFX3-201ENST00000302303 TRPM6Q9BX84 2022 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 TCRBV9S1A1TA0A576 114 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 POM121BA6NF01 834 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 LRRC72A6NJI9 287 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms