RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CSH1P0DML2 217 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CSH2P0DML3 217 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CASP9P55211 416 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RHBDL3P58872 404 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FAM131AQ6UXB0 335 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PYROXD2Q8N2H3 581 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 OR4K2Q8NGD2 314 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 COPS4Q9BT78 406 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CRNNQ9UBG3 495 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FBXO5Q9UKT4 447 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 R3HDM2Q9Y2K5 976 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 A0A075B6Q4 140 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TRBC1P01850 177 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CD48P09326 243 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FUT4P22083 530 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ALG11Q2TAA5 492 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TRIM40Q6P9F5 258 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 APOLD1Q96LR9 279 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LPIN3Q9BQK8 851 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RACGAP1Q9H0H5 632 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TPK1Q9H3S4 243 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TMLHEQ9NVH6 421 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NKIRAS2Q9NYR9 191 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RAB23Q9ULC3 237 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SIN3BO75182 1162 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TRIM3O75382 744 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ARF4P18085 180 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PRKCIP41743 596 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HTRA1Q92743 480 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FAM105AQ9NUU6 356 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TRAF6Q9Y4K3 522 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FAM149AA5PLN7 773 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 OR2AG2A6NM03 316 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AXIN1O15169 862 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PCDH1Q08174 1060 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PRKG2Q13237 762 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NKX2-3Q8TAU0 364 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LMLNQ96KR4 655 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 JSRP1Q96MG2 331 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 VWA7Q9Y334 891 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RASGRP1O95267 797 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ITGA2P17301 1181 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ITGB5P18084 799 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF132P52740 706 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TAF10Q12962 218 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TAPT1Q6NXT6 567 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 USP50Q70EL3 339 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 IKBIPQ70UQ0 350 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AZIN2Q96A70 460 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 B3GALT6Q96L58 329 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 Q96MT0 163 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 C3orf18Q9UK00 162 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 KCNU1A8MYU2 1149 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 IL12AP29459 219 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CORO1AP31146 461 aaKnown RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PUDPQ08623 228 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ARSHQ5FYA8 562 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 C9orf64Q5T6V5 341 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CADM2Q8N3J6 435 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SPOCK2Q92563 424 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PRRG4Q9BZD6 226 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LMAN2LQ9H0V9 348 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NMUR1Q9HB89 426 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CHRAC1Q9NRG0 131 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RSL24D1Q9UHA3 163 aaKnown RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ADAMTS13Q76LX8 1427 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MAP2K7O14733 419 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FPGTO14772 594 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 KPNA5O15131 536 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HDAC3O15379 428 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DSC2Q02487 901 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 VPS26BQ4G0F5 336 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PLEKHG4Q58EX7 1191 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 IRF2BP2Q7Z5L9 587 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 XYLT1Q86Y38 959 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ATAD1Q8NBU5 361 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 EXOSC8Q96B26 276 aaKnown RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CPXM1Q96SM3 734 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CYP2S1Q96SQ9 504 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TCF12Q99081 682 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SPATA5L1Q9BVQ7 753 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LRRC4CQ9HCJ2 640 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PDP1Q9P0J1 537 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLIT1O75093 1534 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC9A3R1O14745 358 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 UGT2B17O75795 530 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ECDO95905 644 aaPredicted RBP13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PDHA2P29803 388 aa13.54□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SSR2P43308 183 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms