RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 MED16Q9Y2X0 877 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 DRGXA6NNA5 263 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 H3BSA7 217 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 AZIN1O14977 448 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 ADAMTS4O75173 837 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 RPP40O75818 363 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 CDKN1CP49918 316 aaPredicted RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 ATP4BP51164 291 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 STX1BP61266 288 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 TXNL4AP83876 142 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 TNK2Q07912 1038 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 TAF10Q12962 218 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 TRIP4Q15650 581 aaPredicted RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 KANK2Q63ZY3 851 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 SPPL2CQ8IUH8 684 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 COLGALT2Q8IYK4 626 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 DCP1BQ8IZD4 617 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 FBXO32Q969P5 355 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 TMIGD2Q96BF3 282 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 PPWD1Q96BP3 646 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 ZFRQ96KR1 1074 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 RPL10LQ96L21 214 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 FBXO44Q9H4M3 255 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 DUS2Q9NX74 493 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 PLK2Q9NYY3 685 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 FAM50BQ9Y247 325 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 SPO11Q9Y5K1 396 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 ARHGEF37A1IGU5 675 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 FAM149AA5PLN7 773 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 FXYD1O00168 92 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 CLASP2O75122 1294 aaKnown RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 FGF4P08620 206 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 PCSK6P29122 969 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 PRDX3P30048 256 aaKnown RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 FMO4P31512 558 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 RGRP47804 291 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 SUOXP51687 545 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 ZNF157P51786 506 aaPredicted RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 PRKCQQ04759 706 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 DSC1Q08554 894 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 TRIM71Q2Q1W2 868 aaKnown RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 PAQR3Q6TCH7 311 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 CARM1Q86X55 608 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 SLC15A3Q8IY34 581 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 GPR150Q8NGU9 434 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 OR4L1Q8NH43 312 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 LINC01599Q8WXQ3 324 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 TMEM79Q9BSE2 394 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 AARSD1Q9BTE6 412 aaKnown RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 ZBED2Q9BTP6 218 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 POLR1EQ9GZS1 481 aaKnown RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 CCSER2Q9H7U1 834 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 SEMA4BQ9NPR2 832 aaPredicted RBP13.58□□□□□ -0.23
BCCIP-202ENST00000299130 CATSPERZQ9NTU4 200 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 CMTM6Q9NX76 183 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 POLG2Q9UHN1 485 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 TIMM22Q9Y584 194 aa13.58□□□□□ -0.23
BCCIP-202ENST00000299130 UBA6A0AVT1 1052 aaPredicted RBP13.58□□□□□ -0.24
BCCIP-202ENST00000299130 SAC3D1A6NKF1 404 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 HTRA2O43464 458 aaPredicted RBP13.58□□□□□ -0.24
BCCIP-202ENST00000299130 AKAP10O43572 662 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 PRAMEF11O60813 436 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 GFAPP14136 432 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 HGFP14210 728 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 EEF1DP29692 281 aaKnown RBP13.58□□□□□ -0.24
BCCIP-202ENST00000299130 SOX11P35716 441 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 PBX3P40426 434 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 KCNQ1P51787 676 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 STC1P52823 247 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 DIO3P55073 304 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 PTPRRQ15256 657 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 OR2T34Q8NGX1 318 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 OR2T3Q8NH03 318 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
BCCIP-202ENST00000299130 TUBGCP3Q96CW5 907 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 CDKN2AIPNLQ96HQ2 116 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 FEM1CQ96JP0 617 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 TEX37Q96LM6 180 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 SLC30A3Q99726 388 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 PDFQ9HBH1 243 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 SLC52A3Q9NQ40 469 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 OLAHQ9NV23 265 aa13.58□□□□□ -0.24
BCCIP-202ENST00000299130 VWA8A3KMH1 1905 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 A0A0U1RQS6 177 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 ARHGAP10A1A4S6 786 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 SUPT3HB4E1H0 165 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 PDLIM1O00151 329 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 CDC7O00311 574 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 SUPT3HO75486 399 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 AGTR2P50052 363 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 CRHR2Q13324 411 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 ZNF235Q14590 738 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 MRNIPQ6NTE8 343 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 SCIMPQ6UWF3 145 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 OR7D4Q8NG98 312 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 BRSK1Q8TDC3 778 aa13.57□□□□□ -0.24
BCCIP-202ENST00000299130 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms