RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 DHCR24Q15392 516 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 LIPMQ5VYY2 423 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 KLC3Q6P597 504 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 KIAA0907Q7Z7F0 614 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 NAT16Q8N8M0 369 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 LPGAT1Q92604 370 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 UBXN10Q96LJ8 280 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 AARSD1Q9BTE6 412 aaKnown RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 UNKQ9C0B0 810 aaKnown RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 RSPH9Q9H1X1 276 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 MSRAQ9UJ68 235 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 UBA6A0AVT1 1052 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 PFDN6O15212 129 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 BNIP3LO60238 219 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 CCDC166P0CW27 439 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 CCNHP51946 323 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 BNIP1Q12981 228 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 PEX6Q13608 980 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 KCNC3Q14003 757 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 CARD16Q5EG05 197 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 PIM3Q86V86 326 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 PIWIL2Q8TC59 973 aaKnown RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 OSCP1Q8WVF1 389 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 RSPRY1Q96DX4 576 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 SORT1Q99523 831 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 POPDC3Q9HBV1 291 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 SLCO3A1Q9UIG8 710 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 DNAJC16Q9Y2G8 782 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 FNDC3AQ9Y2H6 1198 aaKnown RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 N6AMT1Q9Y5N5 214 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 C1orf232A0A0U1RR37 186 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 CAPN8A6NHC0 703 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 CYP17A1P05093 508 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 BMP1P13497 986 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 POLR2EP19388 210 aaKnown RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 TTPAP49638 278 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 SUOXP51687 545 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 ZRANB3Q5FWF4 1079 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 TECRLQ5HYJ1 363 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 AARS2Q5JTZ9 985 aaKnown RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 PSAPL1Q6NUJ1 521 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 NAPRTQ6XQN6 538 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 NPAS3Q8IXF0 933 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 VOPP1Q96AW1 172 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 EID2BQ96D98 161 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 CDCA3Q99618 268 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 SIKE1Q9BRV8 207 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 CPEB1Q9BZB8 566 aaKnown RBP14.22□□□□□ -0.13
C9orf3-202ENST00000297979 ZFYVE1Q9HBF4 777 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 DZANK1Q9NVP4 752 aa14.22□□□□□ -0.13
C9orf3-202ENST00000297979 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-202ENST00000297979 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-202ENST00000297979 POP4O95707 220 aaKnown RBP14.21□□□□□ -0.13
C9orf3-202ENST00000297979 ADH5P11766 374 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 ARRB2P32121 409 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 VIPR2P41587 438 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 CDKN1CP49918 316 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-202ENST00000297979 RAD51Q06609 339 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 RAB30Q15771 203 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 TMEM215Q68D42 235 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 DPY19L3Q6ZPD9 716 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 ZSWIM9Q86XI8 627 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 WDR75Q8IWA0 830 aaKnown RBP14.21□□□□□ -0.13
C9orf3-202ENST00000297979 PIANPQ8IYJ0 282 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 ANKRD49Q8WVL7 239 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 C19orf43Q9BQ61 176 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 GATA5Q9BWX5 397 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-202ENST00000297979 CCDC68Q9H2F9 335 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 ZDHHC6Q9H6R6 413 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 HEY2Q9UBP5 337 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 ERVW-1Q9UQF0 538 aa14.21□□□□□ -0.13
C9orf3-202ENST00000297979 EPOPA6NHQ4 379 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 TRIM24O15164 1050 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 ADH1CP00326 375 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 FSHRP23945 695 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 HNF1BP35680 557 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 XIAPP98170 497 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 ACAP2Q15057 778 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 FXNQ16595 210 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 EML3Q32P44 896 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 FAM78AQ5JUQ0 283 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 RARS2Q5T160 578 aaKnown RBP14.21□□□□□ -0.14
C9orf3-202ENST00000297979 TMEM207Q6UWW9 146 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 Q6ZVU0 165 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 MTDHQ86UE4 582 aaKnown RBP14.21□□□□□ -0.14
C9orf3-202ENST00000297979 ECHDC3Q96DC8 303 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 WWP1Q9H0M0 922 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 SUV39H2Q9H5I1 410 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 FAM96AQ9H5X1 160 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 ZFP69BQ9UJL9 534 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 FBXO10Q9UK96 956 aa14.21□□□□□ -0.14
C9orf3-202ENST00000297979 HOXC11O43248 304 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-202ENST00000297979 DLX3O60479 287 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SRP72O76094 671 aaKnown RBP14.2□□□□□ -0.14
C9orf3-202ENST00000297979 HSPA4LO95757 839 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 RBP1P09455 135 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 FMO4P31512 558 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 AQP5P55064 265 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 TIAL1Q01085 375 aaKnown RBP eCLIP14.2□□□□□ -0.14
C9orf3-202ENST00000297979 CACNG1Q06432 222 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms