RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 HKDC1Q2TB90 917 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 NADK2Q4G0N4 442 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 PACRGLQ8N7B6 248 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 TEX47Q8TBZ9 253 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 DNAAF2Q9NVR5 837 aaKnown RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 NKX1-2Q9UD57 310 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-201ENST00000296302 SNX7Q9UNH6 387 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.65
PBRM1-201ENST00000296302 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 CNTN2Q02246 1040 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 ZBED5Q49AG3 693 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 NBPF12Q5TAG4 269 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 CCDC36Q8IYA8 594 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 TMCO6Q96DC7 493 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 TINF2Q9BSI4 451 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 OSGEPL1Q9H4B0 414 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 GNPDA1P46926 289 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 TPTEP56180 551 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 BRMS1LQ5PSV4 323 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 PPP1R26Q5T8A7 1209 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 NEK5Q6P3R8 708 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 ZFPM1Q8IX07 1006 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 ZZZ3Q8IYH5 903 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 SCAIQ8N9R8 606 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 SKA1Q96BD8 255 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 DNAJC1Q96KC8 554 aaKnown RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 FNDC11Q9BVV2 318 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 SLC39A8Q9C0K1 460 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 RASSF1Q9NS23 344 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 PSME2Q9UL46 239 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 B4GALT4O60513 344 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 FTH1P02794 183 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 PAX3P23760 479 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 GBE1Q04446 702 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 PUDPQ08623 228 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 GRM3Q14832 879 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 ACAP2Q15057 778 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 CPSF6Q16630 551 aaKnown RBP eCLIP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 SLC39A12Q504Y0 691 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 ZNF607Q96SK3 696 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 YME1L1Q96TA2 773 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 QSOX1O00391 747 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 LGALS2P05162 132 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 URODP06132 367 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 CHRNB2P17787 502 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 EPORP19235 508 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 POU5F1Q01860 360 aaKnown RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 PEX6Q13608 980 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 GALNT5Q7Z7M9 940 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 PEG10Q86TG7 708 aaKnown RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 SMYD1Q8NB12 490 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 FCGR1BQ92637 280 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 C1GALT1C1Q96EU7 318 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 TSPAN18Q96SJ8 248 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 C2orf49Q9BVC5 232 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-201ENST00000296302 FAIM2Q9BWQ8 316 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 DUSP16Q9BY84 665 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 CIPCQ9C0C6 399 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 IKZF4Q9H2S9 585 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 SIX2Q9NPC8 291 aa11.01□□□□□ -0.65
PBRM1-201ENST00000296302 AQP12BA6NM10 295 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 ADRA1BP35368 520 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 TIE1P35590 1138 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 AKR1D1P51857 326 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 CA9Q16790 459 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 DACT2Q5SW24 774 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 RALGPS2Q86X27 583 aaPredicted RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 AQP12AQ8IXF9 295 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 RASSF5Q8WWW0 418 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 C1orf21Q9H246 121 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 KLF11O14901 512 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 MPZL2O60487 215 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FABP3P05413 133 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 NR2F1P10589 423 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 DPEP1P16444 411 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 BMP7P18075 431 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 ABL2P42684 1182 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 AP5B1Q2VPB7 878 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 CCDC157Q569K6 752 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 CELF3Q5SZQ8 465 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 RAP1GAP2Q684P5 730 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FSTL4Q6MZW2 842 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 PLPPR4Q7Z2D5 763 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FAM220AQ7Z4H9 259 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 KIAA0319LQ8IZA0 1049 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 ELMO1Q92556 727 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 DIRAS2Q96HU8 199 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FAM124BQ9H5Z6 455 aaPredicted RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 PFDN2Q9UHV9 154 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 MST1RQ04912 1400 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 PPLO60437 1756 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FAM92AA1XBS5 289 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms