RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TMEM110Q86TL2 294 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 SPATA6LQ8N4H0 392 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 BTBD10Q9BSF8 475 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 CEP44Q9C0F1 390 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 ILVBLA1L0T0 632 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 TM7SF2O76062 418 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 ATP13A5Q4VNC0 1218 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 IRF7Q92985 503 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 EMID1Q96A84 441 aaPredicted RBP17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 IGSF21Q96ID5 467 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 CDRT15Q96T59 188 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 RHOBTB2Q9BYZ6 727 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 ERN1O75460 977 aaKnown RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 C2P06681 752 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 VAV1P15498 845 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 C1DQ13901 141 aaKnown RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 C17orf99Q6UX52 265 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 CFAP206Q8IYR0 622 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 CLEC4CQ8WTT0 213 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 CNBD2Q96M20 576 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 SAR1AQ9NR31 198 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 HMGXB4Q9UGU5 601 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 KLHL3Q9UH77 587 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 SCML2Q9UQR0 700 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 A0A1B0GW55 424 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 ADAMTS3O15072 1205 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 FYNP06241 537 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 CD48P09326 243 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUX4L2P0CJ85 424 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUX4L3P0CJ86 424 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUX4L4P0CJ87 422 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUX4L5P0CJ88 424 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUX4L6P0CJ89 424 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUX4L7P0CJ90 424 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 MAT2AP31153 395 aaKnown RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 BST1Q10588 318 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 CMC1Q7Z7K0 106 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 GATAD2AQ86YP4 633 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 OSBPL2Q9H1P3 480 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 PNPLA8Q9NP80 782 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 BATF3Q9NR55 127 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUX4Q9UBX2 424 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 OR2AG2A6NM03 316 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 PRR23D1E9PI22 279 aaPredicted RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 H3BN98 237 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 PRR23D2P0DMB1 279 aaPredicted RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 CSF2RAP15509 400 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 MTHFRP42898 656 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 HADHBP55084 474 aaKnown RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 IRF5Q13568 498 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DPYSL2Q16555 572 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 TEKT5Q96M29 485 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 NOD2Q9HC29 1040 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 IL1RAPL1Q9NZN1 696 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 CD84Q9UIB8 345 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 ANGPT4Q9Y264 503 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 DLG5Q8TDM6 1919 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 HAPLN1P10915 354 aaPredicted RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 PAICSP22234 425 aaKnown RBP17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 LPCAT2Q7L5N7 544 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 NACC2Q96BF6 587 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 IL23AQ9NPF7 189 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 ARMCX1Q9P291 453 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 BTRCQ9Y297 605 aa17.66■□□□□ 0.42
CDC42EP3-201ENST00000295324 SNRPB2P08579 225 aaKnown RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 TSPAN8P19075 237 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 CDH3P22223 829 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 AAK1Q2M2I8 961 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 TSTD2Q5T7W7 516 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 ANXA8L1Q5VT79 327 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SLC30A9Q6PML9 568 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 FUKQ8N0W3 1084 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 LRRN4CLQ8ND94 238 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 NELL1Q92832 810 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SIPA1Q96FS4 1042 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 AARSD1Q9BTE6 412 aaKnown RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 MMADHCQ9H3L0 296 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 RERGLQ9H628 205 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 CCSER2Q9H7U1 834 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 PPEF2O14830 753 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 STK16O75716 305 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 NR2F1P10589 423 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 CMPK1P30085 196 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 PDE12Q6L8Q7 609 aaKnown RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 HID1Q8IV36 788 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 AHI1Q8N157 1196 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 PCDH19Q8TAB3 1148 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 ZNF514Q96K75 400 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 FNIP2Q9P278 1114 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 DUSP12Q9UNI6 340 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 HIST1H2ABP04908 130 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 GJA1P17302 382 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 MAGEA11P43364 429 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 ATXN7L2Q5T6C5 722 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SYPL2Q5VXT5 272 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 HIST3H2AQ7L7L0 130 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 HIST1H2ACQ93077 130 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms