RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 WSB2Q9NYS7 404 aaPredicted RBP15.12■□□□□ 0.01
CCDC140-201ENST00000295226 MBD1Q9UIS9 605 aaPredicted RBP15.12■□□□□ 0.01
CCDC140-201ENST00000295226 PLAAQ9Y263 795 aa15.12■□□□□ 0.01
CCDC140-201ENST00000295226 PKP3Q9Y446 797 aa15.12■□□□□ 0.01
CCDC140-201ENST00000295226 ZCWPW2A0A1B0GU75 182 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 MAGEB16A2A368 324 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 ZNF217O75362 1048 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 RECQL5O94762 991 aaPredicted RBP15.11■□□□□ 0.01
CCDC140-201ENST00000295226 VAPBO95292 243 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 PAK4O96013 591 aaPredicted RBP15.11■□□□□ 0.01
CCDC140-201ENST00000295226 IGLV3-19P01714 112 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 MYZAPP0CAP1 466 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 PRSS56P0CW18 603 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 ZNF30P17039 623 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 ARNTP27540 789 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 CD6P30203 668 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SPINT3P49223 89 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 PMS2P54278 862 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SFSWAPQ12872 951 aaKnown RBP15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SRSF5Q13243 272 aaKnown RBP15.11■□□□□ 0.01
CCDC140-201ENST00000295226 CRYMQ14894 314 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SLMAPQ14BN4 828 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SKIDA1Q1XH10 827 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 C3orf62Q6ZUJ4 267 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 TECPR1Q7Z6L1 1165 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 PELI3Q8N2H9 469 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 CDKN2AIPNLQ96HQ2 116 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 ATP6V1G3Q96LB4 118 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 COQ10AQ96MF6 247 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SRPK1Q96SB4 655 aaKnown RBP15.11■□□□□ 0.01
CCDC140-201ENST00000295226 FAM96AQ9H5X1 160 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 VPS37BQ9H9H4 285 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SGK2Q9HBY8 427 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 MRM3Q9HC36 420 aaKnown RBP15.11■□□□□ 0.01
CCDC140-201ENST00000295226 SCN8AQ9UQD0 1980 aa15.11■□□□□ 0.01
CCDC140-201ENST00000295226 CCDC162PA2VCL2 907 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 H0Y858 1186 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 SLC31A1O15431 190 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 SHOX2O60902 331 aaPredicted RBP15.1■□□□□ 0.01
CCDC140-201ENST00000295226 USP1O94782 785 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 POLBP06746 335 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 ERVK-10P10266 1014 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 BCKDHBP21953 392 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 CA5AP35218 305 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 FAM151BQ6UXP7 276 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 OR2T34Q8NGX1 318 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 OR6P1Q8NGX9 317 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 PTCD2Q8WV60 388 aaKnown RBP15.1■□□□□ 0.01
CCDC140-201ENST00000295226 ZBTB9Q96C00 473 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 AGAP2Q99490 1192 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 MYOCQ99972 504 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 PHACTR1Q9C0D0 580 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 PREBQ9HCU5 417 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 IL26Q9NPH9 171 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 SLC17A6Q9P2U8 582 aa15.1■□□□□ 0.01
CCDC140-201ENST00000295226 LRRC72A6NJI9 287 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 GAPDHSO14556 408 aaPredicted RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 WNT9AO14904 365 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 RPP40O75818 363 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 TM7SF2O76062 418 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 OXTRP30559 389 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 CDKN1CP49918 316 aaPredicted RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 RPS21P63220 83 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 PEX6Q13608 980 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 ZNF284Q2VY69 593 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 TMEM259Q4ZIN3 620 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 CEP85LQ5SZL2 805 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 AGBL2Q5U5Z8 902 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 STEAP4Q687X5 459 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 CEP128Q6ZU80 1094 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 NLRP9Q7RTR0 991 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 PTAR1Q7Z6K3 402 aaPredicted RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 HORMAD1Q86X24 394 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 RELL1Q8IUW5 271 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UBLCP1Q8WVY7 318 aaPredicted RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 RIOK2Q9BVS4 552 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 ABCG8Q9H221 673 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 EPB41L4BQ9H329 900 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 EBF2Q9HAK2 575 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 TMBIM4Q9HC24 238 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 PKD2L2Q9NZM6 624 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 FAM169AQ9Y6X4 670 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 K7ESM1 405 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 RAD51BO15315 384 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A9O60656 530 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 FSBPO95073 299 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 TTC4O95801 387 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 GOT2P00505 430 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 NUDT17P0C025 328 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A6P19224 532 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A1P22309 533 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A4P22310 534 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 MC4RP32245 332 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A3P35503 534 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 UGT1A5P35504 534 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 ARCN1P48444 511 aaKnown RBP15.09■□□□□ 0.01
CCDC140-201ENST00000295226 PRAMEP78395 509 aa15.09■□□□□ 0.01
CCDC140-201ENST00000295226 XIAPP98170 497 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms