RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 C10orf107Q8IVU9 208 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF540Q8NDQ6 660 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 OR12D3Q9UGF7 316 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 C3orf18Q9UK00 162 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 ADAM30Q9UKF2 790 aa11.37□□□□□ -0.59
NPC1L1-201ENST00000289547 NOTOA8MTQ0 251 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 NOL4O94818 638 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PCNAP12004 261 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF37AP17032 561 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 MATKP42679 507 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 COX10Q12887 443 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PEX6Q13608 980 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 QPRTQ15274 297 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 ARHGAP36Q6ZRI8 547 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 TBCDQ9BTW9 1192 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 MKL2Q9ULH7 1088 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 MBLAC1A4D2B0 266 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 NEDD8-MDP1E9PL57 170 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PER2O15055 1255 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 MIPP30301 263 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PBX3P40426 434 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 GABRB2P47870 512 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 CD151P48509 253 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF143P52747 638 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 DLG1Q12959 904 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 FASTKD3Q14CZ7 662 aaKnown RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 SPDYE7PQ495Y7 208 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 DSELQ8IZU8 1212 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 C12orf29Q8N999 325 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 KBTBD8Q8NFY9 601 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 OR8D1Q8WZ84 308 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PCED1BQ96HM7 432 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 BTN2A3PQ96KV6 586 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 FBXL18Q96ME1 805 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 KLHL31Q9H511 634 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 POMKQ9H5K3 350 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PLLPQ9Y342 182 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PDLIM1O00151 329 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 H6PDO95479 791 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 ABCB1P08183 1280 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 SRP54P61011 504 aaKnown RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 GRM3Q14832 879 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 ZSWIM7Q19AV6 140 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 TTLL9Q3SXZ7 439 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 C7orf26Q96N11 449 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 TRPV5Q9NQA5 729 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 RBM22Q9NW64 420 aaKnown RBP eCLIP11.36□□□□□ -0.591e-9■□□□□ 9.5
NPC1L1-201ENST00000289547 CRNNQ9UBG3 495 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 PCDHA11Q9Y5I1 949 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 TAF1P21675 1872 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 CHADO15335 359 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A9O60656 530 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 USP12O75317 370 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A6P19224 532 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A1P22309 533 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A4P22310 534 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 KDELR1P24390 212 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A3P35503 534 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A5P35504 534 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 GRIA4P48058 902 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 FMO1Q01740 532 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 MRNIPQ6NTE8 343 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT3A1Q6NUS8 523 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 NEK5Q6P3R8 708 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 ADHFE1Q8IWW8 467 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 FNDC5Q8NAU1 212 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 BLOC1S5Q8TDH9 187 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 CXorf40AQ8TE69 158 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 RNF39Q9H2S5 420 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 SERHL2Q9H4I8 314 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A7Q9HAW7 530 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A10Q9HAW8 530 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT1A8Q9HAW9 530 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 MOV10Q9HCE1 1003 aaKnown RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 POLMQ9NP87 494 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 SERHLQ9NQF3 203 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 TRHDEQ9UKU6 1024 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 RAP2CQ9Y3L5 183 aa11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 MTF2Q9Y483 593 aaPredicted RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
NPC1L1-201ENST00000289547 TMCC2O75069 709 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ITGAVP06756 1048 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC26A3P40879 764 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 BNC1Q01954 994 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 POU6F1Q14863 301 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ZDHHC24Q6UX98 284 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 PHF13Q86YI8 300 aaPredicted RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ACMSDQ8TDX5 336 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 HTR3CQ8WXA8 447 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 VAT1Q99536 393 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 OLFM1Q99784 485 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TRMT61BQ9BVS5 477 aaKnown RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 RMND5AQ9H871 391 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TRIM45Q9H8W5 580 aaPredicted RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 LIN28AQ9H9Z2 209 aaKnown RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 POLG2Q9UHN1 485 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 HACD1B0YJ81 288 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms