RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 IL9RQ01113 521 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 CDK18Q07002 472 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 ALG11Q2TAA5 492 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 ZFYVE27Q5T4F4 411 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 LRRC66Q68CR7 880 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 DENND5AQ6IQ26 1287 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 ZNF765Q7L2R6 523 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 RAB44Q7Z6P3 723 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-201ENST00000288344 TXLNBQ8N3L3 684 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 FAM181AQ8N9Y4 354 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 COX14Q96I36 57 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 AGAP2Q99490 1192 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 MLPHQ9BV36 600 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-201ENST00000288344 CARD9Q9H257 536 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 NFKBIL1Q9UBC1 381 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-201ENST00000288344 TRHDEQ9UKU6 1024 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 TMPRSS11EQ9UL52 423 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 CSNK1G3Q9Y6M4 447 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 DGKBQ9Y6T7 804 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 SCN8AQ9UQD0 1980 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 EPG5Q9HCE0 2579 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 RGSL1A5PLK6 1076 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 TPP1O14773 563 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 TNFRSF10CO14798 259 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 CLDN7O95471 211 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 NDST3O95803 873 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 CEACAM5P06731 702 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ELFN1P0C7U0 828 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 NFKB1P19838 968 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 PSMA3P25788 255 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 GRK6P43250 576 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 SPINT3P49223 89 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ARRB1P49407 418 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 GDF10P55107 478 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 NAP1L1P55209 391 aaKnown RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 WNT3AP56704 352 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 KIAA1024LP59773 190 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ITKQ08881 620 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 PDE1CQ14123 709 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 NFATC4Q14934 902 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 SUZ12Q15022 739 aaKnown RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ZNF542PQ5EBM4 170 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ANKRD20A2Q5SQ80 823 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 HENMT1Q5T8I9 393 aaKnown RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ANKRD20A1Q5TYW2 823 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ANKRD20A3Q5VUR7 823 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 MACC1Q6ZN28 852 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ADAT2Q7Z6V5 191 aaKnown RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 PARGQ86W56 976 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 SLC13A5Q86YT5 568 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 NRSN1Q8IZ57 195 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 TTC30BQ8N4P2 665 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 OR4C6Q8NH72 309 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 DTX3LQ8TDB6 740 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 RHBDD1Q8TEB9 315 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 PDCD6IPQ8WUM4 868 aaKnown RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ADAMTS14Q8WXS8 1223 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 SCAMP4Q969E2 229 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 HAUS1Q96CS2 278 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ZNF830Q96NB3 372 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 FAM118BQ9BPY3 351 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 FRMD8Q9BZ67 464 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 ARNT2Q9HBZ2 717 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 FGF22Q9HCT0 170 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 KCTD5Q9NXV2 234 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 DNPEPQ9ULA0 475 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 OR1A2Q9Y585 309 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 SPO11Q9Y5K1 396 aa9.14□□□□□ -0.95
HMGN1-201ENST00000288344 PCYT1BQ9Y5K3 369 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-201ENST00000288344 PRR19A6NJB7 356 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 FADS2P1A8MWK0 482 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 GAPDHSO14556 408 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 TNFSF14O43557 240 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 METTL18O95568 372 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 CYP2A6P11509 494 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 XPAP23025 273 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 CA5AP35218 305 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 HK3P52790 923 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 EIF3EP60228 445 aaKnown RBP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 HNRNPKP61978 463 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 SIRPB2Q5JXA9 342 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 DRICH1Q6PGQ1 229 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 OGFOD3Q6PK18 319 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 ADAMTSL4Q6UY14 1074 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 USP45Q70EL2 814 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 PID1Q7Z2X4 250 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 C17orf82Q86X59 251 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 NRROSQ86YC3 692 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 CCDC50Q8IVM0 306 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 RBFAQ8N0V3 343 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGN1-201ENST00000288344 UBL4BQ8N7F7 174 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 OR1E3Q8WZA6 343 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 SPATA13Q96N96 652 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 CDC6Q99741 560 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 LRRC61Q9BV99 259 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 BOCQ9BWV1 1114 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 C1QTNF7Q9BXJ2 289 aa9.13□□□□□ -0.95
HMGN1-201ENST00000288344 GBA3Q9H227 469 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms