RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 OSCP1Q8WVF1 389 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ZNF597Q96LX8 424 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 RPRD1AQ96P16 312 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 SEPT5Q99719 369 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 HIPK3Q9H422 1215 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 RAD21L1Q9H4I0 556 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 PCDH12Q9NPG4 1184 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 IFT80Q9P2H3 777 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ZMYM5Q9UJ78 669 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ADAMTS5Q9UNA0 930 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 PABPN1LA6NDY0 278 aaKnown RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 AGRPO00253 132 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 NOBOXO60393 691 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 SNAP91O60641 907 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ITGB6P18564 788 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 OXTRP30559 389 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ARRDC4Q8NCT1 418 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ACOX2Q99424 681 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 CHID1Q9BWS9 393 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 APOL5Q9BWW9 433 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 AFF4Q9UHB7 1163 aaKnown RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 PGAP2Q9UHJ9 254 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 AP1G1O43747 822 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 MMP3P08254 477 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 FUT4P22083 530 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 EFEMP1Q12805 493 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 SFSWAPQ12872 951 aaKnown RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 TRAP1Q12931 704 aaKnown RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ZRANB3Q5FWF4 1079 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 PRMT9Q6P2P2 845 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 TMEM126BQ8IUX1 230 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 CPSF7Q8N684 471 aaKnown RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 DQX1Q8TE96 717 aaKnown RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ANKRD49Q8WVL7 239 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ADAM2Q99965 735 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 HGH1Q9BTY7 390 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 BLOC1S6Q9UL45 172 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 SH3PXD2BA1X283 911 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 K7EPI3 171 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 NME4O00746 187 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 GUCA1CO95843 209 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 BROXQ5VW32 411 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 GLYATQ6IB77 296 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 CLEC14AQ86T13 490 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 CMTR2Q8IYT2 770 aaKnown RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 ZCCHC7Q8N3Z6 543 aaKnown RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 SMARCD1Q96GM5 515 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 ABHD8Q96I13 439 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 EXOC2Q96KP1 924 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 HOPXQ9BPY8 73 aaPredicted RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 KIFC1Q9BW19 673 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 CNGB3Q9NQW8 809 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 SEPT3Q9UH03 358 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 TMEM247A6NEH6 219 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 IL7RP16871 459 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 PIK3CGP48736 1102 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 MTPNP58546 118 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 ARHGAP1Q07960 439 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 RFTN1Q14699 578 aaPredicted RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 FAM98BQ52LJ0 330 aaKnown RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 TIGD7Q6NT04 549 aaPredicted RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 DUS1LQ6P1R4 473 aaKnown RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 LRRC58Q96CX6 371 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 CAPNS2Q96L46 248 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 C3orf30Q96M34 536 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 DACH2Q96NX9 599 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 NDFIP2Q9NV92 336 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 IPPQ9Y573 584 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 GMEB1Q9Y692 573 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 ZSCAN9O15535 394 aaPredicted RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 GGT5P36269 586 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 CAPGP40121 348 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 SCNN1GP51170 649 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 C8orf59Q8N0T1 100 aaPredicted RBP13.36□□□□□ -0.27
SCAF4-201ENST00000286835 CENPSQ8N2Z9 138 aa13.36□□□□□ -0.27
SCAF4-201ENST00000286835 ZNF487B1APH4 448 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 CYP4B1P13584 511 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 TTKP33981 857 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 GSK3BP49841 420 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 RENBPP51606 427 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 VAC14Q08AM6 782 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 BNIP2Q12982 314 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 PLD3Q8IV08 490 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 SLC15A3Q8IY34 581 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 MICU2Q8IYU8 434 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 ZBTB8BQ8NAP8 495 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-201ENST00000286835 METTL6Q8TCB7 284 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■■ 54.9
SCAF4-201ENST00000286835 ULK4Q96C45 1275 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 TNFRSF12AQ9NP84 129 aa13.35□□□□□ -0.27
SCAF4-201ENST00000286835 ATP11BQ9Y2G3 1177 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms