RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C1QTNF8P60827 252 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 CTBP1Q13363 440 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 GRB14Q14449 540 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SLC36A3Q495N2 470 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 KDELC1Q6UW63 502 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 CYP2R1Q6VVX0 501 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TAC4Q86UU9 113 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 DHFR2Q86XF0 187 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 CBR4Q8N4T8 237 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 MINDY1Q8N5J2 469 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 PCYOX1LQ8NBM8 494 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 GBF1Q92538 1859 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.37□□□□□ -0.75
SKA1-201ENST00000285116 FBXL8Q96CD0 374 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 MOCOSQ96EN8 888 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 PCED1BQ96HM7 432 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SENP8Q96LD8 212 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 FICDQ9BVA6 458 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 GOLGA2P5Q9HBQ8 144 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 POPDC3Q9HBV1 291 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 KLK14Q9P0G3 267 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 DLGAP1O14490 977 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 GPX3P22352 226 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 JAK1P23458 1154 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SLC12A2P55011 1212 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TMBIM6P55061 237 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TRAF2Q12933 501 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 RALGDSQ12967 914 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 CYP2A13Q16696 494 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TRIM16LQ309B1 348 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 UGT3A2Q3SY77 523 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 ZNF362Q5T0B9 420 aaPredicted RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 ZNF470Q6ECI4 717 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 LCN8Q6JVE9 175 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 FAM117BQ6P1L5 589 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 ABRAXAS1Q6UWZ7 409 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 CYHR1Q6ZMK1 362 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 FRA10AC1Q70Z53 315 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TMEM40Q8WWA1 233 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 PEX13Q92968 403 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TADA1Q96BN2 335 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 FEM1CQ96JP0 617 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 CCDC138Q96M89 665 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 YTHDF1Q9BYJ9 559 aaKnown RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 FAM49AQ9H0Q0 323 aaPredicted RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 TMEM30AQ9NV96 361 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 GTSE1Q9NYZ3 720 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TMEM98Q9Y2Y6 226 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 NDUFAF1Q9Y375 327 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 USP34Q70CQ2 3546 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TRIOO75962 3097 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 COL6A3P12111 3177 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SAC3D1A6NKF1 404 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 ZNF839A8K0R7 811 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SLC7A4O43246 635 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SEC24DO94855 1032 aaPredicted RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 MAP4P27816 1152 aaKnown RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 PCSK1P29120 753 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 ITGADQ13349 1161 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 POU6F1Q14863 301 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 AGKQ53H12 422 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 DEPDC1Q5TB30 811 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 KCTD8Q6ZWB6 473 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SPATA22Q8NHS9 363 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 PNPT1Q8TCS8 783 aaKnown RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 SEPT8Q92599 483 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 SLC25A51Q9H1U9 297 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 TRAF6Q9Y4K3 522 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 CORINQ9Y5Q5 1042 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 IRAK2O43187 625 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 DYNC1LI2O43237 492 aaPredicted RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 BCL10O95999 233 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 ZNF182P17025 639 aaPredicted RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 S100A1P23297 94 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 RPL9P32969 192 aaKnown RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 SUOXP51687 545 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 GRIK2Q13002 908 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 ZNF460Q14592 562 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 ZNF678Q5SXM1 525 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 CANT1Q8WVQ1 401 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 TAMM41Q96BW9 452 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 PKMYT1Q99640 499 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 C9orf16Q9BUW7 83 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 NAA50Q9GZZ1 169 aaKnown RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
SKA1-201ENST00000285116 MFSD1Q9H3U5 465 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 SMOC2Q9H3U7 446 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 ACSS2Q9NR19 701 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 AGPAT4Q9NRZ5 378 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 UBP1Q9NZI7 540 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 GIT1Q9Y2X7 761 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 DOCK4Q8N1I0 1966 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 KRBA1A5PL33 1030 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 MROH6A6NGR9 719 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 CLOCKO15516 846 aa10.36□□□□□ -0.75
SKA1-201ENST00000285116 CYP11A1P05108 521 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms