RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PAPSS2O95340 614 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CTSLP07711 333 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 KCNA5P22460 613 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 HADHAP40939 763 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 MAGEA12P43365 314 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 SNRPD1P62314 119 aaKnown RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 TIAL1Q01085 375 aaKnown RBP eCLIP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 UGP2Q16851 508 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 VWA5B1Q5TIE3 1220 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 VITQ6UXI7 678 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 FITM2Q8N6M3 262 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 MRPL38Q96DV4 380 aaKnown RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 SAMD11Q96NU1 681 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 ACOX2Q99424 681 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 ZFYVE1Q9HBF4 777 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 PNPOQ9NVS9 261 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 HS3ST2Q9Y278 367 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 KNL1Q8NG31 2342 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 A0A0J9YYE9 177 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 TRBC1P01850 177 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CHRNGP07510 517 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 IGFBP4P22692 258 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 LHCGRP22888 699 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 PEX19P40855 299 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 FRG1Q14331 258 aaKnown RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 PTPRNQ16849 979 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 TAF1BQ53T94 588 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CARD16Q5EG05 197 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 LRRC66Q68CR7 880 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 C6orf89Q6UWU4 347 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CLEC14AQ86T13 490 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 TMEM151AQ8N4L1 468 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CCNYL1Q8N7R7 359 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 PHF21BQ96EK2 531 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CHFRQ96EP1 664 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 MRGPRX3Q96LB0 322 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 RETREG1Q9H6L5 497 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 ALG9Q9H6U8 611 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 HPS4Q9NQG7 708 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 HAUS2Q9NVX0 235 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 SIRPGQ9P1W8 387 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 TRIM33Q9UPN9 1127 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 TBX10O75333 385 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 MTX2O75431 263 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 NDUFS3O75489 264 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 FCARP24071 287 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 SERPINA4P29622 427 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 LIG3P49916 1009 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 AP1S1P61966 158 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 STX3Q13277 289 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 SLC12A1Q13621 1099 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 PDE12Q6L8Q7 609 aaKnown RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 MRNIPQ6NTE8 343 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CRTC1Q6UUV9 634 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 GPR149Q86SP6 731 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 DRAXINQ8NBI3 349 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 LEMD2Q8NC56 503 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 ACMSDQ8TDX5 336 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 GPR78Q96P69 363 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 SUV39H2Q9H5I1 410 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 IL17CQ9P0M4 197 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 CLEC1BQ9P126 229 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 FAM8A1Q9UBU6 413 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 DPP7Q9UHL4 492 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 MBD1Q9UIS9 605 aaPredicted RBP10.95□□□□□ -0.66
GGPS1-201ENST00000282841 IKZF3Q9UKT9 509 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 SARDHQ9UL12 918 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 FIS1Q9Y3D6 152 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 PKP3Q9Y446 797 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 H3BQ06 376 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 ZBTB14O43829 449 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 SKAP2O75563 359 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 SRP72O76094 671 aaKnown RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 PRAMEF1O95521 474 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 MPOP05164 745 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 CISD3P0C7P0 127 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 RALBP11234 206 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 STC1P52823 247 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 NAGLUP54802 743 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 KYAT3Q6YP21 454 aaKnown RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 TBC1D1Q86TI0 1168 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 ANKS4BQ8N8V4 417 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 SIDT2Q8NBJ9 832 aaKnown RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 CALML6Q8TD86 181 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 SCAMP4Q969E2 229 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 EBF4Q9BQW3 602 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 ECT2Q9H8V3 914 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 IL26Q9NPH9 171 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 TBC1D3BA6NDS4 549 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 LRRC14BA6NHZ5 514 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 NCF1BA6NI72 391 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 NCF1CA8MVU1 366 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 H3BMM5 538 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 SIN3BO75182 1162 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 UBOX5O94941 541 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 MYL2P10916 166 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 NCF1P14598 390 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 BPIP17213 487 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms