RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 HADHQ16836 314 aaKnown RBP12.72□□□□□ -0.37
CD44-203ENST00000278386 FIGNQ5HY92 759 aa12.72□□□□□ -0.37
CD44-203ENST00000278386 CCDC122Q5T0U0 273 aa12.72□□□□□ -0.37
CD44-203ENST00000278386 TMEM164Q5U3C3 297 aa12.72□□□□□ -0.37
CD44-203ENST00000278386 HGSNATQ68CP4 663 aa12.72□□□□□ -0.37
CD44-203ENST00000278386 MARK2Q7KZI7 788 aaKnown RBP12.72□□□□□ -0.37
CD44-203ENST00000278386 TRIM74Q86UV6 250 aa12.72□□□□□ -0.37
CD44-203ENST00000278386 SGF29Q96ES7 293 aa12.72□□□□□ -0.37
CD44-203ENST00000278386 CCDC74BQ96LY2 380 aa12.72□□□□□ -0.37
CD44-203ENST00000278386 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
CD44-203ENST00000278386 BZW2Q9Y6E2 419 aaKnown RBP12.72□□□□□ -0.37
CD44-203ENST00000278386 CFAP46Q8IYW2 2715 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 BSNQ9UPA5 3926 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 B8ZZF3 427 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 MYO1FO00160 1098 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 EFSO43281 561 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 B4GAT1O43505 415 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 SLC28A2O43868 658 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 FUCA1P04066 466 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 SERPING1P05155 500 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 PDHA1P08559 390 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 CD48P09326 243 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 ZNF30P17039 623 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 CA4P22748 312 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 CD82P27701 267 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 TEAD1P28347 426 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.37
CD44-203ENST00000278386 FANCCQ00597 558 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 DSC2Q02487 901 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 DPTQ07507 201 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 NR1I3Q14994 352 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 IQCB1Q15051 598 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 NCBP2-AS2Q69YL0 99 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 TIGD7Q6NT04 549 aaPredicted RBP12.71□□□□□ -0.37
CD44-203ENST00000278386 ADAMTSL4Q6UY14 1074 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 PRICKLE2Q7Z3G6 844 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 ZNF438Q7Z4V0 828 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 GALNT13Q8IUC8 556 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 NAGSQ8N159 534 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 ZSCAN1Q8NBB4 408 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 ZNF564Q8TBZ8 553 aaPredicted RBP12.71□□□□□ -0.37
CD44-203ENST00000278386 PIH1D2Q8WWB5 315 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 EXTL1Q92935 676 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 SMIM14Q96QK8 99 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 ABCG8Q9H221 673 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 DNPEPQ9ULA0 475 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 SLC17A4Q9Y2C5 497 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 TMEM98Q9Y2Y6 226 aa12.71□□□□□ -0.37
CD44-203ENST00000278386 HEMK1Q9Y5R4 338 aaPredicted RBP12.71□□□□□ -0.37
CD44-203ENST00000278386 ZNF106Q9H2Y7 1883 aaKnown RBP12.71□□□□□ -0.37
CD44-203ENST00000278386 A0A0J9YYE9 177 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 A0A1W2PQJ5 194 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 C9orf172C9J069 976 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 PYCARD-AS1I3L0S3 204 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 HGSO14964 777 aaPredicted RBP12.7□□□□□ -0.38
CD44-203ENST00000278386 INPP4BO15327 924 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 ASMTLO95671 621 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 SOD1P00441 154 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 TRBC1P01850 177 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 CYP1A2P05177 515 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 PYGLP06737 847 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 CCL4P13236 92 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 GPR3P46089 330 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 GALNT2Q10471 571 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 DPYSL3Q14195 570 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 NR1D2Q14995 579 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 CLPPQ16740 277 aaPredicted RBP12.7□□□□□ -0.38
CD44-203ENST00000278386 NKAIN2Q5VXU1 208 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 ALKBH5Q6P6C2 394 aaKnown RBP12.7□□□□□ -0.38
CD44-203ENST00000278386 TECPR1Q7Z6L1 1165 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 C17orf82Q86X59 251 aaPredicted RBP12.7□□□□□ -0.38
CD44-203ENST00000278386 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 TEX26Q8N6G2 289 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 LPCAT1Q8NF37 534 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 CPLX3Q8WVH0 158 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 JPH3Q8WXH2 748 aaPredicted RBP12.7□□□□□ -0.38
CD44-203ENST00000278386 SCAMP4Q969E2 229 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 TDRD1Q9BXT4 1180 aaKnown RBP12.7□□□□□ -0.38
CD44-203ENST00000278386 KCNK4Q9NYG8 393 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 CHKBQ9Y259 395 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 PPIL1Q9Y3C6 166 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 PLEKHM1Q9Y4G2 1056 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 ST14Q9Y5Y6 855 aa12.7□□□□□ -0.38
CD44-203ENST00000278386 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 A0A087X0T9 212 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 IGHV5-10-1A0A0J9YXX1 117 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 STMND1H3BQB6 276 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 FZD6O60353 706 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 HLA-DQB2P05538 268 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 FAM228BP0C875 321 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 MPSTP25325 297 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 CSF2RBP32927 897 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 CSTF2P33240 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
CD44-203ENST00000278386 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 UBASH3AP57075 661 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 ZBED6P86452 979 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms