RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TXNL4AP83876 142 aaKnown RBP12.91□□□□□ -0.34
C9orf3-201ENST00000277198 SLC5A9Q2M3M2 681 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 MGAT5BQ3V5L5 792 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 RBM20Q5T481 1227 aaKnown RBP12.91□□□□□ -0.34
C9orf3-201ENST00000277198 OVOS1Q6IE37 1185 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 GK5Q6ZS86 529 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 LARP4Q71RC2 724 aaKnown RBP eCLIP12.91□□□□□ -0.34
C9orf3-201ENST00000277198 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 PCYOX1LQ8NBM8 494 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 CASP10Q92851 521 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 HLA-CQ95604 372 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 PBXIP1Q96AQ6 731 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 EME1Q96AY2 570 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 MARK4Q96L34 752 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 VN1R3Q9BXE9 311 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 SUDS3Q9H7L9 328 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-201ENST00000277198 UBE2ZQ9H832 354 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-201ENST00000277198 POPDC3Q9HBV1 291 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 TMLHEQ9NVH6 421 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 TMEM181Q9P2C4 612 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 HS3ST4Q9Y661 456 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 FGF4P08620 206 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 PSMC3P17980 439 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 CHRNA4P43681 627 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SLC11A1P49279 550 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 USP46P62068 366 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 MYBPC1Q00872 1141 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TUSC3Q13454 348 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 AGKQ53H12 422 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 MARC1Q5VT66 337 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 MSANTD2Q6P1R3 559 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 PRMT9Q6P2P2 845 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 FAM43BQ6ZT52 329 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SPATA2LQ8IUW3 424 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TEX26Q8N6G2 289 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 RNF148Q8N7C7 305 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 OR13J1Q8NGT2 312 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 OR10T2Q8NGX3 314 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 HMGCLL1Q8TB92 370 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 RSPH1Q8WYR4 309 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TADA1Q96BN2 335 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SGF29Q96ES7 293 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SUSD3Q96L08 255 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 CNBD2Q96M20 576 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 NDNQ99608 321 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 HAUS8Q9BT25 410 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 GSTO2Q9H4Y5 243 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 NDFIP2Q9NV92 336 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 ETAA1Q9NY74 926 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 CROTQ9UKG9 612 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 DMTF1Q9Y222 760 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TLR6Q9Y2C9 796 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TCF20Q9UGU0 1960 aaKnown RBP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 NEMP2A6NFY4 417 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 HIDE1A8MVS5 230 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 DLL1O00548 723 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 FBP2O00757 339 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 PGM3O95394 542 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 GALTP07902 379 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 LTBRP36941 435 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 STX1BP61266 288 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 NAA20P61599 178 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 HERVK_113P63132 956 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TMEM259Q4ZIN3 620 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF678Q5SXM1 525 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 IL23RQ5VWK5 629 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 PLPP4Q5VZY2 271 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 CD300LGQ6UXG3 332 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SCD5Q86SK9 330 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 ISCA2Q86U28 154 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 MON1AQ86VX9 555 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 AUTS2Q8WXX7 1259 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SLC39A13Q96H72 371 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 HOPXQ9BPY8 73 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 PAAF1Q9BRP4 392 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 ERVK-6Q9BXR3 956 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 LMAN2LQ9H0V9 348 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TLR9Q9NR96 1032 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 TMEM248Q9NWD8 314 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 RIMKLBQ9ULI2 386 aa12.9□□□□□ -0.34
C9orf3-201ENST00000277198 MTF2Q9Y483 593 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-201ENST00000277198 MRASO14807 208 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 AURKAO14965 403 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 VILLO15195 856 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 S1PR4O95977 384 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 BMP1P13497 986 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 NRIP1P48552 1158 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 ACVR1Q04771 509 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
C9orf3-201ENST00000277198 PAOXQ6QHF9 649 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms