RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 POLR3BQ9NW08 1133 aaPredicted RBP15.33■□□□□ 0.04
COPS3-201ENST00000268717 THG1LQ9NWX6 298 aaKnown RBP15.33■□□□□ 0.04
COPS3-201ENST00000268717 WNT16Q9UBV4 365 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 FBXL21Q9UKT6 434 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 ERVW-1Q9UQF0 538 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 VWA7Q9Y334 891 aa15.33■□□□□ 0.04
COPS3-201ENST00000268717 OR51F1A6NGY5 319 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 WISP3O95389 354 aaPredicted RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 PIGNO95427 931 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 ATP5BP06576 529 aaKnown RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 F7P08709 466 aaPredicted RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 CD9P21926 228 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 PMLP29590 882 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 NNMTP40261 264 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 DGKGP49619 791 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 TTPAP49638 278 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 CCNHP51946 323 aaPredicted RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 PTPN5P54829 565 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 TMPRSS15P98073 1019 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 OCRLQ01968 901 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 CHI3L2Q15782 390 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 HECTD2Q5U5R9 776 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 C16orf46Q6P387 395 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 CEP97Q8IW35 865 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 SUGP1Q8IWZ8 645 aaKnown RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 CENPLQ8N0S6 344 aaPredicted RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 OR6Y1Q8NGX8 325 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 TTC8Q8TAM2 541 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 MRGPRX3Q96LB0 322 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 MCCC1Q96RQ3 725 aaPredicted RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 MECRQ9BV79 373 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 PLA2G2FQ9BZM2 168 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 SUV39H2Q9H5I1 410 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 ZFP14Q9HCL3 533 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 THAP1Q9NVV9 213 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 RAPGEFL1Q9UHV5 662 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 SLC8A2Q9UPR5 921 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 HCN4Q9Y3Q4 1203 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 CCL22O00626 93 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 PHGDHO43175 533 aaKnown RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 BUD23O43709 281 aaKnown RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 KIAA0754O94854 1291 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 SERPINE1P05121 402 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 CPA3P15088 417 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 FDXRP22570 491 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 VIPR2P41587 438 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 ADARP55265 1226 aaKnown RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 IRF9Q00978 393 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 BST1Q10588 318 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 PTPRCAPQ14761 206 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 EIF4HQ15056 248 aaKnown RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 CDKN3Q16667 212 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 FAM83EQ2M2I3 478 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 ZNF789Q5FWF6 425 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 RBM20Q5T481 1227 aaKnown RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 TMEM215Q68D42 235 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 TBC1D1Q86TI0 1168 aaPredicted RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 CBARPQ8N350 705 aaPredicted RBP15.32■□□□□ 0.04
COPS3-201ENST00000268717 HCAR2Q8TDS4 363 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 FRS2Q8WU20 508 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 LRIG1Q96JA1 1093 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 FAM83CQ9BQN1 747 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 TRIM55Q9BYV6 548 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 GPR63Q9BZJ6 419 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 ZFYVE1Q9HBF4 777 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 COMMD10Q9Y6G5 202 aa15.32■□□□□ 0.04
COPS3-201ENST00000268717 HEPACAM2A8MVW5 462 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 DLDP09622 509 aaKnown RBP15.31■□□□□ 0.04
COPS3-201ENST00000268717 FGF3P11487 239 aaPredicted RBP15.31■□□□□ 0.04
COPS3-201ENST00000268717 MC4RP32245 332 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 RECQLP46063 649 aaPredicted RBP15.31■□□□□ 0.04
COPS3-201ENST00000268717 XIAPP98170 497 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 CACNG1Q06432 222 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 FCHO2Q0JRZ9 810 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 IFT88Q13099 833 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 STX3Q13277 289 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 SEMA3AQ14563 771 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 GEN1Q17RS7 908 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 AGAP9Q5VTM2 703 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 BRAT1Q6PJG6 821 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 CERS6Q6ZMG9 384 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 DPY19L3Q6ZPD9 716 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 USP45Q70EL2 814 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 SIX5Q8N196 739 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 STK40Q8N2I9 435 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 RYBPQ8N488 228 aaPredicted RBP15.31■□□□□ 0.04
COPS3-201ENST00000268717 GBP7Q8N8V2 638 aaPredicted RBP15.31■□□□□ 0.04
COPS3-201ENST00000268717 OR2A12Q8NGT7 310 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 OR6K2Q8NGY2 324 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 GRIN3AQ8TCU5 1115 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 LPGAT1Q92604 370 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.31■□□□□ 0.04
COPS3-201ENST00000268717 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 UBXN10Q96LJ8 280 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 GPR78Q96P69 363 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 OLFM1Q99784 485 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 MRPL57Q9BQC6 102 aaKnown RBP15.31■□□□□ 0.04
COPS3-201ENST00000268717 SIKE1Q9BRV8 207 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 AARSD1Q9BTE6 412 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms