RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LHCGRP22888 699 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 MAPK9P45984 424 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 GPR3P46089 330 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 SKOR1P84550 965 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 ZBED6P86452 979 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 ZFP36L1Q07352 338 aaKnown RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 NFATC3Q12968 1075 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 MMRN1Q13201 1228 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 NR1I3Q14994 352 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 CLPPQ16740 277 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 SNAP47Q5SQN1 464 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 ALKBH5Q6P6C2 394 aaKnown RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 VASH2Q86V25 355 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 FAM129CQ86XR2 697 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 PELI3Q8N2H9 469 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 PGBD5Q8N414 524 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 IL22RA1Q8N6P7 574 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 RCBTB1Q8NDN9 531 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 EXD1Q8NHP7 514 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 ZNF564Q8TBZ8 553 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 JPH3Q8WXH2 748 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 CTNNBL1Q8WYA6 563 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 TTC9Q92623 222 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 DPYSL5Q9BPU6 564 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 NUDT22Q9BRQ3 303 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 FRMD8Q9BZ67 464 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 CHKBQ9Y259 395 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 RP1P56715 2156 aa12.2□□□□□ -0.46
TRAF4-202ENST00000262396 SMG1Q96Q15 3661 aaKnown RBP12.2□□□□□ -0.46
TRAF4-202ENST00000262396 A0A1W2PQJ5 194 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 HGSO14964 777 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-202ENST00000262396 MATN3O15232 486 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 EFSO43281 561 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 B4GAT1O43505 415 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SNX2O60749 519 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 MAP3K6O95382 1288 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 KRT7P08729 469 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 TPM1P09493 284 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SFTPCP11686 197 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SLC2A4P14672 509 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 CR2P20023 1033 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 MPSTP25325 297 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 TEAD1P28347 426 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 MAN1A1P33908 653 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 GARSP41250 739 aaKnown RBP12.19□□□□□ -0.46
TRAF4-202ENST00000262396 TNNT3P45378 269 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-202ENST00000262396 B4GALNT1Q00973 533 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 DPTQ07507 201 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 LRP8Q14114 963 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 PDK2Q15119 407 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 NKAIN2Q5VXU1 208 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 TXNRD3NBQ6F5E7 133 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 PCSK4Q6UW60 755 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 ADAMTSL4Q6UY14 1074 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 CHST15Q7LFX5 561 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-202ENST00000262396 TRIM74Q86UV6 250 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 AGBL5Q8NDL9 886 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SNRNP27Q8WVK2 155 aaKnown RBP12.19□□□□□ -0.46
TRAF4-202ENST00000262396 PATE1Q8WXA2 126 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SYN2Q92777 582 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-202ENST00000262396 EXTL1Q92935 676 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SCAMP4Q969E2 229 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 CCDC74BQ96LY2 380 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 TAAR9Q96RI9 348 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 ABCG8Q9H221 673 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 ZNHIT6Q9NWK9 470 aaKnown RBP12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SLC39A1Q9NY26 324 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 PKD2L2Q9NZM6 624 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 SLC17A4Q9Y2C5 497 aa12.19□□□□□ -0.46
TRAF4-202ENST00000262396 A0A0J9YYE9 177 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 C1orf232A0A0U1RR37 186 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 SYCE3A1L190 88 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 DUX1O43812 170 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 MFSD11O43934 449 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 PEX11BO96011 259 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 TRBC1P01850 177 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 SLC4A1P02730 911 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 CYP1A2P05177 515 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 PDHA1P08559 390 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 H2AFZP0C0S5 128 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 GM2AP17900 193 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 ETV5P41161 510 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 GPLD1P80108 840 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 DSC2Q02487 901 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 SLC25A11Q02978 314 aaKnown RBP12.18□□□□□ -0.46
TRAF4-202ENST00000262396 TRA2AQ13595 282 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAF4-202ENST00000262396 C16orf72Q14CZ0 275 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 PTPRRQ15256 657 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 ANKRD20A8PQ5CZ79 823 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 XKR5Q6UX68 686 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 H2AFVQ71UI9 128 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 LUZP1Q86V48 1076 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 NRROSQ86YC3 692 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms