RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TPMTP51580 245 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 TBC1D25Q3MII6 688 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 STEAP4Q687X5 459 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 CEP128Q6ZU80 1094 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 TRMT10CQ7L0Y3 403 aaKnown RBP27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 OR14C36Q8NHC7 312 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 HACD3Q9P035 362 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 IL17CQ9P0M4 197 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 FKBPLQ9UIM3 349 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 TCRBV9S1A1TA0A576 114 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 FAM47DPA6NHR8 397 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 USP1O94782 785 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 VAPBO95292 243 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 SHBGP04278 402 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 PRSS56P0CW18 603 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 ERVK-10P10266 1014 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 CYP2A6P11509 494 aaPredicted RBP27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 ARHGEF7Q14155 803 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 ALS2CLQ60I27 953 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 LIPIQ6XZB0 460 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 FBF1Q8TES7 1133 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 HDAC10Q969S8 669 aa27.44■■□□□ 1.98
SMARCD3-201ENST00000262188 MAGEB16A2A368 324 aa27.43■■□□□ 1.98
SMARCD3-201ENST00000262188 STX7O15400 261 aaKnown RBP27.43■■□□□ 1.98
SMARCD3-201ENST00000262188 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.43■■□□□ 1.98
SMARCD3-201ENST00000262188 RLN3Q8WXF3 142 aa27.43■■□□□ 1.98
SMARCD3-201ENST00000262188 TRABDQ9H4I3 376 aa27.43■■□□□ 1.98
SMARCD3-201ENST00000262188 MRM3Q9HC36 420 aaKnown RBP27.43■■□□□ 1.98
SMARCD3-201ENST00000262188 LRRK1Q38SD2 2015 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 GM2AP17900 193 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 HMGCLP35914 325 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 ETV3P41162 512 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 SETDB1Q15047 1291 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 CAPRIN2Q6IMN6 1127 aaKnown RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 GSDMBQ8TAX9 411 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 PTCD2Q8WV60 388 aaKnown RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 MRRFQ96E11 262 aaKnown RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 EBF2Q9HAK2 575 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 PPANQ9NQ55 473 aaKnown RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 SMYD2Q9NRG4 433 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 CYP8B1Q9UNU6 501 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 SCN8AQ9UQD0 1980 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 PCDH8O95206 1070 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 ELFN1P0C7U0 828 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 BPIP17213 487 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 AOC1P19801 751 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 ACSL1P33121 698 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 ADPRHP54922 357 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 SKIDA1Q1XH10 827 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 SPANXN3Q5MJ09 141 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 TSSK4Q6SA08 328 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 Q6ZVL8 140 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 SDCCAG8Q86SQ7 713 aaPredicted RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 MREGQ8N565 214 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 FAM160A2Q8N612 972 aaPredicted RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 STYXQ8WUJ0 223 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 NAT9Q9BTE0 207 aa27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 C20orf96Q9NUD7 363 aaPredicted RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 NLE1Q9NVX2 485 aaPredicted RBP27.42■■□□□ 1.98
SMARCD3-201ENST00000262188 CXorf49A8MYA2 514 aaPredicted RBP27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 STC1P52823 247 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 SEL1L3Q68CR1 1132 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 C6orf89Q6UWU4 347 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 GPR26Q8NDV2 337 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 OR6P1Q8NGX9 317 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 KLK6Q92876 244 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 TTC25Q96NG3 672 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 INVSQ9Y283 1065 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 PKP3Q9Y446 797 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 DOCK9Q9BZ29 2069 aa27.41■■□□□ 1.98
SMARCD3-201ENST00000262188 CCDC162PA2VCL2 907 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 IMPDH2P12268 514 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 ARCN1P48444 511 aaKnown RBP27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 ZBTB16Q05516 673 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 DMWDQ09019 674 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 ELP6Q0PNE2 266 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 ACOX1Q15067 660 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 THOC1Q96FV9 657 aaKnown RBP27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 CDKN2AIPNLQ96HQ2 116 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 FAM96AQ9H5X1 160 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 C1QAP02745 245 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 C6P13671 934 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 CA5AP35218 305 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 CXCL12P48061 93 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 HSP90AA5PQ58FG0 334 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 FAM151BQ6UXP7 276 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 PTAR1Q7Z6K3 402 aaPredicted RBP27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 CCNJLQ8IV13 435 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 SCAMP4Q969E2 229 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 FAM131CQ96AQ9 280 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 AGAP2Q99490 1192 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 RABGEF1Q9UJ41 708 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 ZDBF2Q9HCK1 2354 aa27.4■■□□□ 1.98
SMARCD3-201ENST00000262188 CACNA1IQ9P0X4 2223 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 USP34Q70CQ2 3546 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 MGRN1O60291 552 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 UGT1A9O60656 530 aa27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 RPP40O75818 363 aaKnown RBP27.39■■□□□ 1.98
SMARCD3-201ENST00000262188 PAPSS2O95340 614 aaPredicted RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms