RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ISCA2Q86U28 154 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 C2CD4AQ8NCU7 369 aaPredicted RBP16.83■□□□□ 0.28
SGPP1-201ENST00000247225 GPRC5AQ8NFJ5 357 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 NCLNQ969V3 563 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 BEGAINQ9BUH8 593 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 CHID1Q9BWS9 393 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 TRIM15Q9C019 465 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 TMLHEQ9NVH6 421 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 IFT80Q9P2H3 777 aaPredicted RBP16.83■□□□□ 0.28
SGPP1-201ENST00000247225 COQ6Q9Y2Z9 468 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 CLASP2O75122 1294 aaKnown RBP16.83■□□□□ 0.28
SGPP1-201ENST00000247225 GPR32O75388 356 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 E2F6O75461 281 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 BCL10O95999 233 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 HSPA1AP0DMV8 641 aaKnown RBP16.83■□□□□ 0.28
SGPP1-201ENST00000247225 HSPA1BP0DMV9 641 aaKnown RBP16.83■□□□□ 0.28
SGPP1-201ENST00000247225 EFEMP1Q12805 493 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 RFTN1Q14699 578 aaPredicted RBP16.83■□□□□ 0.28
SGPP1-201ENST00000247225 MARC1Q5VT66 337 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 LYSMD3Q7Z3D4 306 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 PLEKHA8Q96JA3 519 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 VAT1Q99536 393 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 C9orf16Q9BUW7 83 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 NPLQ9BXD5 320 aaPredicted RBP16.83■□□□□ 0.28
SGPP1-201ENST00000247225 ENTPD7Q9NQZ7 604 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 GID8Q9NWU2 228 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 GALPQ9UBC7 116 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 SH3GLB1Q9Y371 365 aa16.83■□□□□ 0.28
SGPP1-201ENST00000247225 SOAT2O75908 522 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 STAU1O95793 577 aaKnown RBP16.82■□□□□ 0.28
SGPP1-201ENST00000247225 SNAI1O95863 264 aaPredicted RBP16.82■□□□□ 0.28
SGPP1-201ENST00000247225 F9P00740 461 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 COL6A2P12110 1019 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 MATN1P21941 496 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 SLC6A2P23975 617 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 ALDH3B2P48448 385 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 RPL26P61254 145 aaKnown RBP16.82■□□□□ 0.28
SGPP1-201ENST00000247225 FPGSQ05932 587 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 OR4D1Q15615 310 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 DDR2Q16832 855 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 ZNF678Q5SXM1 525 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 MAMDC4Q6UXC1 1216 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 CFAP52Q8N1V2 620 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 THUMPD3Q9BV44 507 aaKnown RBP16.82■□□□□ 0.28
SGPP1-201ENST00000247225 RPF2Q9H7B2 306 aaKnown RBP16.82■□□□□ 0.28
SGPP1-201ENST00000247225 MEAF6Q9HAF1 191 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 CNGB3Q9NQW8 809 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 ANAPC2Q9UJX6 822 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 VPS28Q9UK41 221 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 CCDC154A6NI56 674 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 BTN3A1O00481 513 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 GSTA4O15217 222 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
SGPP1-201ENST00000247225 BMXP51813 675 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 CYP2A13Q16696 494 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 TIGD5Q53EQ6 642 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 SLC15A4Q8N697 577 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 SDCCAG3Q96C92 435 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 HMCESQ96FZ2 354 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 ANKRD60Q9BZ19 345 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 CD300AQ9UGN4 299 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 CORINQ9Y5Q5 1042 aa16.82■□□□□ 0.28
SGPP1-201ENST00000247225 CDC7O00311 574 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 SYNCRIPO60506 623 aaKnown RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 GMNNO75496 209 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 LBPP18428 481 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 GPX3P22352 226 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 ADSLP30566 484 aaPredicted RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 POLR2IP36954 125 aaKnown RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 EIF2B2P49770 351 aaKnown RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 RAD23AP54725 363 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 CYHR1Q6ZMK1 362 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 ARHGAP12Q8IWW6 846 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 BHMTQ93088 406 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 NT5C3BQ969T7 300 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 CENPNQ96H22 339 aaPredicted RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 FAR2Q96K12 515 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 ZNF510Q9Y2H8 683 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 SH3BP1Q9Y3L3 701 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 DNAJC25-GNG10A0A024R161 153 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 KANSL1LA0AUZ9 987 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 GPR39O43194 453 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 GUCA1CO95843 209 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 THP07101 528 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 CYP4B1P13584 511 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 IMPDH1P20839 514 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 PFKPQ01813 784 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 PAQR3Q6TCH7 311 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 LARP4Q71RC2 724 aaKnown RBP eCLIP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 CENPSQ8N2Z9 138 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 FBXO39Q8N4B4 442 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 SLC10A4Q96EP9 437 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 TSPAN17Q96FV3 270 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 FAM210AQ96ND0 272 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 PPP1R10Q96QC0 940 aaKnown RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 SEMA3CQ99985 751 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 MROH8Q9H579 483 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 AGO3Q9H9G7 860 aaKnown RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 CCM2LQ9NUG4 571 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms