RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 RFPL2O75678 378 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 RHOBTB1O94844 696 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 PENKP01210 267 aaPredicted RBP18.43■□□□□ 0.54
HOXC11-201ENST00000243082 ALPIP09923 528 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 CTPS1P17812 591 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 IMPDH1P20839 514 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 CSNK1DP48730 415 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 EPHA5P54756 1037 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 SH2D4BQ5SQS7 431 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 PAQR3Q6TCH7 311 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 CMTM8Q8IZV2 173 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 SPPL3Q8TCT6 385 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 POF1BQ8WVV4 589 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 USP13Q92995 863 aaPredicted RBP18.43■□□□□ 0.54
HOXC11-201ENST00000243082 TNFRSF12AQ9NP84 129 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 TAS2R13Q9NYV9 303 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 FAM50BQ9Y247 325 aa18.43■□□□□ 0.54
HOXC11-201ENST00000243082 HTRA2O43464 458 aaPredicted RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 OR1I1O60431 355 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 ENTPD5O75356 428 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 GKP32189 559 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 HMGCLP35914 325 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 NFKB2Q00653 900 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 SULT2A1Q06520 285 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 NAA25Q14CX7 972 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 OR4D1Q15615 310 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 PTPRNQ16849 979 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 ZRANB3Q5FWF4 1079 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 FRMD7Q6ZUT3 714 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 LYSMD3Q7Z3D4 306 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 RYBPQ8N488 228 aaPredicted RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 RHEBL1Q8TAI7 183 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 GSTO2Q9H4Y5 243 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 TLL1O43897 1013 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 TTPAP49638 278 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 RAP1GDS1P52306 607 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 BCL2L1Q07817 233 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 GALNT1Q10472 559 aaPredicted RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 KLF10Q13118 480 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 PDCD2Q16342 344 aaPredicted RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 DNAL1Q4LDG9 190 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 DGKKQ5KSL6 1271 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 ZNF678Q5SXM1 525 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 VOPP1Q96AW1 172 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 CMTM5Q96DZ9 223 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 CCDC28BQ9BUN5 200 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 GPR63Q9BZJ6 419 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 CCDC68Q9H2F9 335 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 TNKS2Q9H2K2 1166 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 TFB2MQ9H5Q4 396 aaKnown RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 SYTL2Q9HCH5 934 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 GALPQ9UBC7 116 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 NKX1-2Q9UD57 310 aaPredicted RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 CDYLQ9Y232 598 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 VPS9D1Q9Y2B5 631 aa18.42■□□□□ 0.54
HOXC11-201ENST00000243082 FNDC3AQ9Y2H6 1198 aaKnown RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 MTCL1Q9Y4B5 1905 aaKnown RBP18.42■□□□□ 0.54
HOXC11-201ENST00000243082 MEI4A8MW99 385 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 CYBBP04839 570 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 MTHFD2P13995 350 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 PRDX6P30041 224 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 HLA-FP30511 346 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 CTSOP43234 321 aaPredicted RBP18.41■□□□□ 0.54
HOXC11-201ENST00000243082 COPAP53621 1224 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 E2F5Q15329 346 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 TEAD2Q15562 447 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 CTSL3PQ5NE16 218 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 ACAD11Q709F0 780 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 UBE2Q1Q7Z7E8 422 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 CUZD1Q86UP6 607 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 ARHGAP24Q8N264 748 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 MAELQ96JY0 434 aaKnown RBP18.41■□□□□ 0.54
HOXC11-201ENST00000243082 RPL10LQ96L21 214 aaKnown RBP18.41■□□□□ 0.54
HOXC11-201ENST00000243082 ATOH8Q96SQ7 321 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 EML4Q9HC35 981 aaKnown RBP18.41■□□□□ 0.54
HOXC11-201ENST00000243082 GTSE1Q9NYZ3 720 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 PKP3Q9Y446 797 aa18.41■□□□□ 0.54
HOXC11-201ENST00000243082 OAS3Q9Y6K5 1087 aaKnown RBP18.41■□□□□ 0.54
HOXC11-201ENST00000243082 TM7SF2O76062 418 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 TPBGLP0DKB5 382 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 PKMP14618 531 aaKnown RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 MAPK8P45983 427 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 RPL26P61254 145 aaKnown RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 MXRA7P84157 204 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 UNC50Q53HI1 259 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 PITRM1Q5JRX3 1037 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 METTL3Q86U44 580 aaKnown RBP18.4■□□□□ 0.54
HOXC11-201ENST00000243082 TMEM25Q86YD3 366 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 GPR21Q99679 349 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 SLC30A3Q99726 388 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 DERL2Q9GZP9 239 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 ZNF385DQ9H6B1 395 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 RNPEPL1Q9HAU8 725 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 TLR9Q9NR96 1032 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 PRKAG2Q9UGJ0 569 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 IKZF3Q9UKT9 509 aa18.4■□□□□ 0.54
HOXC11-201ENST00000243082 SLC4A7Q9Y6M7 1214 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms