RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CRCPO75575 148 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 SRP72O76094 671 aaKnown RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 BAIAP3O94812 1187 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 ZNF26P17031 533 aaPredicted RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 ATP6V1B2P21281 511 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 RAB27AP51159 221 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 KPNA2P52292 529 aaKnown RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 NDST2P52849 883 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 ROR2Q01974 943 aaKnown RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 SQLEQ14534 574 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 MAP7D1Q3KQU3 841 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 UGT3A2Q3SY77 523 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 RABL3Q5HYI8 236 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 RTP2Q5QGT7 225 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 HMBOX1Q6NT76 420 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 KIAA0408Q6ZU52 694 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 CHSY3Q70JA7 882 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 SAPCD2Q86UD0 394 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 LPCAT1Q8NF37 534 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 PTCD2Q8WV60 388 aaKnown RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 TSPAN17Q96FV3 270 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 TMEM74Q96NL1 305 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 POLR1EQ9GZS1 481 aaKnown RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 UNC93B1Q9H1C4 597 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 SOX17Q9H6I2 414 aaPredicted RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 MRM3Q9HC36 420 aaKnown RBP9.13□□□□□ -0.95
SYDE2-201ENST00000234668 CATSPERZQ9NTU4 200 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 RNF186Q9NXI6 227 aa9.13□□□□□ -0.95
SYDE2-201ENST00000234668 LOC285095A0A1B0GVY8 99 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 UNCXA6NJT0 531 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 H3BSA7 217 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 ZNF37AP17032 561 aaPredicted RBP9.12□□□□□ -0.95
SYDE2-201ENST00000234668 TYMPP19971 482 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 TACR2P21452 398 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 STX1BP61266 288 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 HERVK_113P63132 956 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 PTPRNQ16849 979 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 MYLK3Q32MK0 819 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 RGMBQ6NW40 437 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 SIDT2Q8NBJ9 832 aaKnown RBP9.12□□□□□ -0.95
SYDE2-201ENST00000234668 MDGA1Q8NFP4 955 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 TRIM62Q9BVG3 475 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 ERVK-6Q9BXR3 956 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 FBXO44Q9H4M3 255 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 SPAG4Q9NPE6 437 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 EPS15L1Q9UBC2 864 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 RNF112Q9ULX5 631 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 RNF11Q9Y3C5 154 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 SCN10AQ9Y5Y9 1956 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 CROCCQ5TZA2 2017 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 BTN3A1O00481 513 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 NME4O00746 187 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 AZIN1O14977 448 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 SNAP91O60641 907 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 OAZ2O95190 189 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 VNN2O95498 520 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 PRAMEF12O95522 483 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 GNAO1P09471 354 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 GPX3P22352 226 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 GGT5P36269 586 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 PIK3CGP48736 1102 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 SETMARQ53H47 684 aaPredicted RBP9.12□□□□□ -0.95
SYDE2-201ENST00000234668 C6orf10Q5SRN2 563 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 PSAPL1Q6NUJ1 521 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 SLC24A5Q71RS6 500 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 ABI1Q8IZP0 508 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 CLYBLQ8N0X4 340 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 TET1Q8NFU7 2136 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 ZFP28Q8NHY6 868 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 ASB9Q96DX5 294 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 MPP4Q96JB8 637 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 TMEM79Q9BSE2 394 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 MED16Q9Y2X0 877 aa9.12□□□□□ -0.95
SYDE2-201ENST00000234668 ARHGAP10A1A4S6 786 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 SOCS2O14508 198 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 TRIM24O15164 1050 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 KPNA6O60684 536 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 KATNA1O75449 491 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 NDUFS3O75489 264 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 IGHA2P01877 340 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 SERPINF2P08697 491 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 PLOD1Q02809 727 aaPredicted RBP9.11□□□□□ -0.95
SYDE2-201ENST00000234668 GRM2Q14416 872 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 HERC3Q15034 1050 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 NFE2Q16621 373 aaPredicted RBP9.11□□□□□ -0.95
SYDE2-201ENST00000234668 ZRANB3Q5FWF4 1079 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 TICAM1Q8IUC6 712 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 AFAP1L2Q8N4X5 818 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 DBF4BQ8NFT6 615 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 BTBD9Q96Q07 612 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 FAM192AQ9GZU8 254 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 ABCG8Q9H221 673 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 FKBPLQ9UIM3 349 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 TDRD15B5MCY1 1934 aaKnown RBP9.11□□□□□ -0.95
SYDE2-201ENST00000234668 MYO7AQ13402 2215 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 MTMR11A4FU01 709 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 VILLO15195 856 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 ECI2O75521 394 aa9.11□□□□□ -0.95
SYDE2-201ENST00000234668 RPP40O75818 363 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms