RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ARMC12Q5T9G4 340 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CLHC1Q8NHS4 586 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 GFM2Q969S9 779 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 SMOC2Q9H3U7 446 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 MARCH4Q9P2E8 410 aaPredicted RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CAPN14A8MX76 684 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 JUNP05412 331 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 ARSAP15289 507 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CLVS1Q8IUQ0 354 aaPredicted RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 FAM47BQ8NA70 645 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 EZH1Q92800 747 aaPredicted RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 PNMA8BQ9ULN7 279 aaPredicted RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 EIF3LQ9Y262 564 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 A0A0U1RQS6 177 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 NIPSNAP2O75323 286 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 LINGO3P0C6S8 592 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 NNMTP40261 264 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 RPS6KA3P51812 740 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 ARHGDIAP52565 204 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 FUT10Q6P4F1 479 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 ALKAL1Q6UXT8 129 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 MRPS31Q92665 395 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 IGSF8Q969P0 613 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 OLFM1Q99784 485 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 C1orf21Q9H246 121 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 TLR6Q9Y2C9 796 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 DHRS12A0PJE2 317 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 SLC7A4O43246 635 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 MGEA5O60502 916 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 GGT5P36269 586 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CLCQ05315 142 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CCNIQ14094 377 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 TRIM25Q14258 630 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CPSF6Q16630 551 aaKnown RBP eCLIP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CYS1Q717R9 158 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 KBTBD2Q8IY47 623 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 ELMOD1Q8N336 334 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 SIDT2Q8NBJ9 832 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 TRIB2Q92519 343 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 PKP2Q99959 881 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 DPY30Q9C005 99 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 HMX1Q9NP08 348 aaPredicted RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 MYRFQ9Y2G1 1151 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 NRXN2Q9P2S2 1712 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 ENPP3O14638 875 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 ZNF682O95780 498 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 PBLDP30039 288 aaPredicted RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 INHBEP58166 350 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 BCL2L1Q07817 233 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 ATXN7L2Q5T6C5 722 aaPredicted RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 RETSATQ6NUM9 610 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 C16orf87Q6PH81 154 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 GPR141Q7Z602 305 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 GALNT15Q8N3T1 639 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 TSPAN14Q8NG11 270 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 COQ10BQ9H8M1 238 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 PARVBQ9HBI1 364 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 EIF2B4Q9UI10 523 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 BRWD3Q6RI45 1802 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 IQCF5A8MTL0 148 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 LDLRP01130 860 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 USP46P62068 366 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 RPL38P63173 70 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 PIK3R6Q5UE93 754 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 AFTPHQ6ULP2 937 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 GPRIN3Q6ZVF9 776 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 DDX53Q86TM3 631 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 EGFL6Q8IUX8 553 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 NKAPQ8N5F7 415 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 SPPL2BQ8TCT7 592 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 SCLYQ96I15 445 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 TLE6Q9H808 572 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 AKTIPQ9H8T0 292 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 URODP06132 367 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 PKMP14618 531 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 HALP42357 657 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 PARP15Q460N3 678 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 NSUN5Q96P11 429 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 ELOVL6Q9H5J4 265 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 KIF17Q9P2E2 1029 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 SLC45A1Q9Y2W3 748 aa13.55□□□□□ -0.24
RAB3D-201ENST00000222120 FCF1Q9Y324 198 aaKnown RBP13.55□□□□□ -0.24
RAB3D-201ENST00000222120 RAD51BO15315 384 aa13.54□□□□□ -0.24
RAB3D-201ENST00000222120 NPHS1O60500 1241 aa13.54□□□□□ -0.24
RAB3D-201ENST00000222120 OR4F21O95013 312 aa13.54□□□□□ -0.24
RAB3D-201ENST00000222120 CNPP09543 421 aaKnown RBP13.54□□□□□ -0.24
RAB3D-201ENST00000222120 RPL5P46777 297 aaKnown RBP13.54□□□□□ -0.24
RAB3D-201ENST00000222120 GSSP48637 474 aa13.54□□□□□ -0.24
RAB3D-201ENST00000222120 NDST2P52849 883 aa13.54□□□□□ -0.24
RAB3D-201ENST00000222120 SCAPQ12770 1279 aa13.54□□□□□ -0.24
RAB3D-201ENST00000222120 TRIP4Q15650 581 aaPredicted RBP13.54□□□□□ -0.24
RAB3D-201ENST00000222120 CENPLQ8N0S6 344 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms