RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 FOXA1P55317 472 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 SPIDRQ14159 915 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 GALNT3Q14435 633 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 SLC14A2Q15849 920 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 NADK2Q4G0N4 442 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 UNC50Q53HI1 259 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 ZNF549Q6P9A3 640 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 LARP4Q71RC2 724 aaKnown RBP eCLIP15.27■□□□□ 0.031e-6■□□□□ 10.2
TGFB1-201ENST00000221930 SLC22A9Q8IVM8 553 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 FUNDC1Q8IVP5 155 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 ARRDC2Q8TBH0 407 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 SLCO4A1Q96BD0 722 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 C19orf60Q96EN9 201 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 SLC45A3Q96JT2 553 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 DNAJC1Q96KC8 554 aaKnown RBP15.27■□□□□ 0.03
TGFB1-201ENST00000221930 CGREF1Q99674 301 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 PRDM5Q9NQX1 630 aaPredicted RBP15.27■□□□□ 0.03
TGFB1-201ENST00000221930 VPS45Q9NRW7 570 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 POLR3BQ9NW08 1133 aaPredicted RBP15.27■□□□□ 0.03
TGFB1-201ENST00000221930 PRG3Q9Y2Y8 225 aaPredicted RBP15.27■□□□□ 0.03
TGFB1-201ENST00000221930 ZNF711Q9Y462 761 aa15.27■□□□□ 0.03
TGFB1-201ENST00000221930 ATXN1LP0C7T5 689 aaKnown RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 RPL5P46777 297 aaKnown RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 SLC7A2P52569 658 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 RHDQ02161 417 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 MTX3Q5HYI7 312 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 ATAD1Q8NBU5 361 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 OR13C4Q8NGS5 318 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 MYEOVQ96EZ4 313 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 UROC1Q96N76 676 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 NSUN5Q96P11 429 aaKnown RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 KCNA7Q96RP8 456 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 SEMA3CQ99985 751 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 SEZ6LQ9BYH1 1024 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 MFSD1Q9H3U5 465 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 AKTIPQ9H8T0 292 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 DNAJC15Q9Y5T4 150 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 BOLA2-SMG1P6H3BVE0 249 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 UBXN8O00124 270 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 MUSKO15146 869 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 TNFAIP8O95379 198 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 RHOQP17081 205 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 ACVRL1P37023 503 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 NDST2P52849 883 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 DCTN2Q13561 401 aaKnown RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 SEMA3AQ14563 771 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 MAPRE2Q15555 327 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 PFKFB4Q16877 469 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 KIF19Q2TAC6 998 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 C6orf10Q5SRN2 563 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 RETREG3Q86VR2 466 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 HERC6Q8IVU3 1022 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 NUP93Q8N1F7 819 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 PTGR2Q8N8N7 351 aaPredicted RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 TRIB2Q92519 343 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 PPWD1Q96BP3 646 aaKnown RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 RANBP9Q96S59 729 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 CIB1Q99828 191 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 SLC25A23Q9BV35 468 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 NOL11Q9H8H0 719 aaKnown RBP15.26■□□□□ 0.03
TGFB1-201ENST00000221930 ACTL7AQ9Y615 435 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 PATJQ8NI35 1801 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 MYO16Q9Y6X6 1858 aa15.26■□□□□ 0.03
TGFB1-201ENST00000221930 WASH4PA8MWX3 477 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 VILLO15195 856 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 GOT2P00505 430 aaKnown RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 FAM58BPP0C7Q3 252 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 SLC2A3P11169 496 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 YBX1P67809 324 aaKnown RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 TIAL1Q01085 375 aaKnown RBP eCLIP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 POLD3Q15054 466 aaPredicted RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 CYTH1Q15438 398 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 UGT3A2Q3SY77 523 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 CCSAPQ6IQ19 270 aaPredicted RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 PEX5LQ8IYB4 626 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 GABPB2Q8TAK5 448 aaPredicted RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 RPRD1AQ96P16 312 aaPredicted RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 SLC29A1Q99808 456 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 MID1IP1Q9NPA3 183 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 TMEM248Q9NWD8 314 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 CCDC162PA2VCL2 907 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 H3BMM5 538 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 SERPINB7O75635 380 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 PAPSS2O95340 614 aaPredicted RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 GNRH1P01148 92 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 C8BP07358 591 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 HERVK_113P63132 956 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 NRG1Q02297 640 aaPredicted RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 DSC3Q14574 896 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 OR4D1Q15615 310 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 MYO1HQ8N1T3 1032 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 DGCR14Q96DF8 476 aaKnown RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 B3GALT6Q96L58 329 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 ERVK-6Q9BXR3 956 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 TRIM8Q9BZR9 551 aa15.25■□□□□ 0.03
TGFB1-201ENST00000221930 TRMT13Q9NUP7 481 aaKnown RBP15.25■□□□□ 0.03
TGFB1-201ENST00000221930 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.25■□□□□ 0.039e-9■■□□□ 13.6
TGFB1-201ENST00000221930 CD300AQ9UGN4 299 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms