RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 STXBP5LQ9Y2K9 1186 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 REXO2Q9Y3B8 237 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 FADS3Q9Y5Q0 445 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 BCORQ6W2J9 1755 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SMIM35A0A1B0GVV1 85 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FABP3P05413 133 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ADRB2P07550 413 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 IRF1P10914 325 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CD86P42081 329 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 GJA8P48165 433 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PTSQ03393 145 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CACNG1Q06432 222 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 EARS2Q5JPH6 523 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 DDI2Q5TDH0 399 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 APOBEC3HQ6NTF7 200 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 TATDN1Q6P1N9 297 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 C16orf46Q6P387 395 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FBXO42Q6P3S6 717 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 MACC1Q6ZN28 852 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ARHGAP36Q6ZRI8 547 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CHMP1BQ7LBR1 199 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 GPR180Q86V85 440 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TMC8Q8IU68 726 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SLC41A1Q8IVJ1 513 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CPNE9Q8IYJ1 553 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SAMD14Q8IZD0 417 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 LPCAT1Q8NF37 534 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 OR2T12Q8NG77 320 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 OR52K1Q8NGK4 314 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 AURKBQ96GD4 344 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 S100A13Q99584 98 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FDXACB1Q9BRP7 624 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 DGCR6LQ9BY27 220 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 DSN1Q9H410 356 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 EPB41L1Q9H4G0 881 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 HHATLQ9HCP6 504 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 QPCTLQ9NXS2 382 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 LOC100506127A0A0U1RQW1 187 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 ANKDD1BA6NHY2 528 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 OR6C75A6NL08 312 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FADS2P1A8MWK0 482 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ORC5O43913 435 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 OR6B1O95007 311 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PRG2P13727 222 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 AKR1A1P14550 325 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 RPL17P18621 184 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 AOC1P19801 751 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FKBP1BP68106 108 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 RGS1Q08116 209 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 C6orf52Q5T4I8 152 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CPTPQ5TA50 214 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SLC30A10Q6XR72 485 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 AGMOQ6ZNB7 445 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PTGR2Q8N8N7 351 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 DCAKDQ8WVC6 231 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PIH1D2Q8WWB5 315 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CEP295NLQ96MC4 621 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PRICKLE1Q96MT3 831 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 SEMA6AQ9H2E6 1030 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FKBP14Q9NWM8 211 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TSR3Q9UJK0 312 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 VWA7Q9Y334 891 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TRAV19A0A0A6YYK7 116 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 PAPSS1O43252 624 aaPredicted RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 CSDE1O75534 798 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 CKMP06732 381 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 C8GP07360 202 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CHRNGP07510 517 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 TFEBP19484 476 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 IGFBP5P24593 272 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CDH5P33151 784 aaPredicted RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 CSTF2P33240 577 aaKnown RBP eCLIP4.4□□□□□ -1.7
CHD9-201ENST00000219084 ATP4BP51164 291 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 SLC25A3Q00325 362 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 SMCO1Q147U7 214 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 EIPR1Q53HC9 387 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 TEX44Q53QW1 395 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CLEC10AQ8IUN9 316 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 C7orf57Q8NEG2 295 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 C17orf50Q8WW18 174 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 MYO19Q96H55 970 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 FNDC11Q9BVV2 318 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 TRIT1Q9H3H1 467 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 EXD2Q9NVH0 621 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 IGSF9Q9P2J2 1179 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 KCNE2Q9Y6J6 123 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 RPTORQ8N122 1335 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 RBBP6Q7Z6E9 1792 aaKnown RBP4.4□□□□□ -1.7
CHD9-201ENST00000219084 FOCADQ5VW36 1801 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 RFXANKO14593 260 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 GABRDO14764 452 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 PGRMC2O15173 223 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 TMCC2O75069 709 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 VTNP04004 478 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 USP17L7P0C7H9 530 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 RAP2AP10114 183 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 CHRNA5P30532 468 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 FMO4P31512 558 aa4.4□□□□□ -1.7
CHD9-201ENST00000219084 PTGIRP43119 386 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms