RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 LPCAT2Q7L5N7 544 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 TMEM135Q86UB9 458 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 NRSN1Q8IZ57 195 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 TBATAQ96M53 351 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 FCRL3Q96P31 734 aaPredicted RBP27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 NAT9Q9BTE0 207 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 C1QTNF7Q9BXJ2 289 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 TSPYL1Q9H0U9 437 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 IL26Q9NPH9 171 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 PCDHGA2Q9Y5H1 932 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 RGSL1A5PLK6 1076 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 PCCBP05166 539 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 MCM3P25205 808 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 CBLBQ13191 982 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 LRRC14Q15048 493 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 IRF4Q15306 451 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 WSCD2Q2TBF2 565 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 ARMC3Q5W041 872 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 CEP128Q6ZU80 1094 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 C11orf74Q86VG3 221 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 MYRIPQ8NFW9 859 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 HDAC10Q969S8 669 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 PLEKHG4BQ96PX9 1271 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 MBNL1Q9NR56 388 aaKnown RBP27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 RAD18Q9NS91 495 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 RIMKLBQ9ULI2 386 aa27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.15■■□□□ 1.94
CHMP4B-201ENST00000217402 GLYATL1P3A0A0U1RQE8 302 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 USP1O94782 785 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 CNR2P34972 360 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 PTGER3P43115 390 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 DCDC1P59894 354 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 CRYMQ14894 314 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 AGERQ15109 404 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 KDM7AQ6ZMT4 941 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 UNC5AQ6ZN44 842 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 PELI3Q8N2H9 469 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 TP53I13Q8NBR0 393 aaPredicted RBP27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 FOXJ1Q92949 421 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 PEX13Q92968 403 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 CDKN2AIPNLQ96HQ2 116 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 SPATA16Q9BXB7 569 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 DUSP15Q9H1R2 295 aaPredicted RBP27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 PLAC1Q9HBJ0 212 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 IL1RAPL1Q9NZN1 696 aa27.14■■□□□ 1.94
CHMP4B-201ENST00000217402 OR51F1A6NGY5 319 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 K7ESM1 405 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 PRAMEF1O95521 474 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 MC4RP32245 332 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 PRAMEP78395 509 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 ACVR1Q04771 509 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 HENMT1Q5T8I9 393 aaKnown RBP27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 ZDHHC20Q5W0Z9 365 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 ZNF765Q7L2R6 523 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 CCNJLQ8IV13 435 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 PALM2Q8IXS6 379 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 RAVER1Q8IY67 606 aaKnown RBP27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 PLA2G15Q8NCC3 412 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 OR6P1Q8NGX9 317 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 ASB12Q8WXK4 309 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 AGAP2Q99490 1192 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 KLF6Q99612 283 aaPredicted RBP27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 CA5BQ9Y2D0 317 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 WDFY4Q6ZS81 3184 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 ABCA7Q8IZY2 2146 aa27.13■■□□□ 1.93
CHMP4B-201ENST00000217402 ZCWPW2A0A1B0GU75 182 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 CCDC162PA2VCL2 907 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 GAPDHSO14556 408 aaPredicted RBP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 GPR39O43194 453 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 VAPBO95292 243 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 TTC4O95801 387 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 HNRNPA2B1P22626 353 aaKnown RBP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 MAOBP27338 520 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 PEX6Q13608 980 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 PLK5Q496M5 336 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 PMS2CLQ68D20 193 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 RAET1GQ6H3X3 334 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 CENPTQ96BT3 561 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 CDH19Q9H159 772 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 KCTD5Q9NXV2 234 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 NFKBIL1Q9UBC1 381 aaPredicted RBP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 EIF2B4Q9UI10 523 aaKnown RBP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 RAB21Q9UL25 225 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 DOCK9Q9BZ29 2069 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 A0A1W2PPC4 97 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 PAMP19021 973 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 PSMA3P25788 255 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 AKT2P31751 481 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 DHPSP49366 369 aaPredicted RBP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 XIAPP98170 497 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 CHRNA6Q15825 494 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 SPANXN3Q5MJ09 141 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 KIAA0930Q6ICG6 404 aaPredicted RBP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 SERAC1Q96JX3 654 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 C19orf43Q9BQ61 176 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 MIR1-1HGQ9H1L0 117 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 CDC42EP4Q9H3Q1 356 aaKnown RBP27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 APPL1Q9UKG1 709 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 SLCO1B1Q9Y6L6 691 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms