RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.52□□□□□ -0.56
DNMT3B-201ENST00000201963 DUSP12Q9UNI6 340 aa11.52□□□□□ -0.56
DNMT3B-201ENST00000201963 DDX60Q8IY21 1712 aaKnown RBP11.52□□□□□ -0.56
DNMT3B-201ENST00000201963 CCDC88AQ3V6T2 1871 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 SH3PXD2BA1X283 911 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 SEC22BO75396 215 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 FGFR1P11362 822 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 RHDQ02161 417 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 PCLAFQ15004 111 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 MORN1Q5T089 497 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 C19orf18Q8NEA5 215 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 C19orf60Q96EN9 201 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 TEKT5Q96M29 485 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 NXF3Q9H4D5 531 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 RPRD1BQ9NQG5 326 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 DTLQ9NZJ0 730 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 PSAT1Q9Y617 370 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 MYH1P12882 1939 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ANKRD31Q8N7Z5 1873 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 C5orf58C9J3I9 102 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 G3V2T6 193 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 FBP2O00757 339 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 RNASEH2AO75792 299 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 BCAS2O75934 225 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 RECQL5O94762 991 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ANXA6P08133 673 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 USP17L7P0C7H9 530 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 FGF3P11487 239 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ITGB6P18564 788 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 PRKCHP24723 683 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 TAPT1Q6NXT6 567 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 CHRDL2Q6WN34 429 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF567Q8N184 647 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 NDRG1Q92597 394 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 QKIQ96PU8 341 aaKnown RBP eCLIP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 NODALQ96S42 347 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 RASSF1Q9NS23 344 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 IFT80Q9P2H3 777 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 COL11A2P13942 1736 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 C2orf81A6NN90 581 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 TBX1O43435 398 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 FADS2O95864 444 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 SPATA31D3P0C874 917 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 CYBAP13498 195 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 FMO4P31512 558 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 GMPRP36959 345 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 CLCN5P51795 746 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 COPZ1P61923 177 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 NRG1Q02297 640 aaPredicted RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 MAPKAPK3Q16644 382 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 CTXN3Q4LDR2 81 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 THOC7Q6I9Y2 204 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 DENND5AQ6IQ26 1287 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 SPATA31D4Q6ZUB0 917 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 GALNT5Q7Z7M9 940 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 DCBLD1Q8N8Z6 715 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 ISOC1Q96CN7 298 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 MOCOSQ96EN8 888 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 TBCCD1Q9NVR7 557 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 DDX43Q9NXZ2 648 aaKnown RBP11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 STMN3Q9NZ72 180 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 TIMM22Q9Y584 194 aa11.52□□□□□ -0.57
DNMT3B-201ENST00000201963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 VPS4BO75351 444 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 FBXO21O94952 628 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 MTHFD1P11586 935 aaKnown RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 SERPINH1P50454 418 aaKnown RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 BCAP31P51572 246 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 RENBPP51606 427 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 TAS2R39P59534 338 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 C1orf220Q5T0J3 134 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 HIPK1Q86Z02 1210 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 DENND6AQ8IWF6 608 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 NIPA2Q8N8Q9 360 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 LEMD2Q8NC56 503 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 OR9I1Q8NGQ6 314 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 FAR1Q8WVX9 515 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 TMIGD2Q96BF3 282 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 PRICKLE1Q96MT3 831 aaPredicted RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 NTPCRQ9BSD7 190 aaKnown RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 ALG2Q9H553 416 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 VWA7Q9Y334 891 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 HTRA2O43464 458 aaPredicted RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 MAFO75444 373 aaPredicted RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 MTHFRP42898 656 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 CCR10P46092 362 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 EPGNQ6UW88 154 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 PDPRQ8NCN5 879 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 B3GALNT2Q8NCR0 500 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 STAG3L4Q8TBR4 150 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 SIGLEC10Q96LC7 697 aa11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 KCTD15Q96SI1 283 aaPredicted RBP11.51□□□□□ -0.57
DNMT3B-201ENST00000201963 RHOBTB2Q9BYZ6 727 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms