RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ifrd2Q9D8U0 441 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ndufa13Q9ERS2 144 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nup50Q9JIH2 466 aaKnown RBP6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Adrm1Q9JKV1 407 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Csnk1eQ9JMK2 416 aaKnown RBP6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fam171a2A2A699 822 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 NuggcD3YWJ0 796 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm10800D3Z496 220 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Srp54bE9PXC0 504 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rap1gds1E9Q912 607 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dsg2O55111 1122 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ezh1P70351 747 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 RalgdsQ03385 852 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tex11Q14AT2 947 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tmem184cQ3TPR7 525 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr301Q7TS04 311 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 TbcdQ8BYA0 1196 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nlrp10Q8CCN1 673 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pdik1lQ8QZR7 341 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr478Q8VG04 314 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 AmotQ8VHG2 1126 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rgs18Q99PG4 235 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ing2Q9ESK4 281 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Eif4hQ9WUK2 248 aaKnown RBP6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mcm3apQ9WUU9 1971 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 A0A1Y7VP24 259 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 A0A286YCD0 109 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pgbd5D3YZI9 523 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 C130060K24RikG3UWA8 416 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp212G3X8R7 492 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tekt5G5E8A8 557 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 NoctO35710 429 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Msr1P30204 458 aaKnown RBP6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cops2P61202 443 aaKnown RBP6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Anxa4P97429 319 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dusp2Q05922 318 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lipo3Q3UT41 399 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Adrbk2Q3UYH7 688 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 1810049J17RikQ3V2G9 153 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lilrb4Q64281 335 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Q6DFW0 481 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Smpd4Q6ZPR5 823 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Slc6a15Q8BG16 729 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Insig1Q8BGI3 259 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fsd1lQ8BYN5 507 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pak5Q8C015 719 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 TmieQ8K467 153 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Aipl1Q924K1 328 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 NgrnQ99KS2 293 aaKnown RBP6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Vsig1Q9D2J4 407 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dus2Q9D7B1 493 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rasgrp2Q9QUG9 608 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dcun1d1Q9QZ73 259 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm11983V9GXS8 105 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Spg11Q3UHA3 2430 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gbp4A4UUI3 631 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp952B0V2W4 504 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 3110082J24RikF6Z6Z2 108 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nccrp1G3X9C2 266 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 FpgtG5E8F4 590 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pik3cdO35904 1043 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ccdc153P0C7Q1 202 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hnrnpa1P49312 320 aaKnown RBP6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mc1rQ01727 315 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sdf4Q61112 361 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Znf185Q62394 352 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fam107aQ78TU8 144 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ip6k2Q80V72 448 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Acat3Q80X81 397 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ccdc68Q8BVC4 333 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lrrtm3Q8BZ81 582 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Slc35c2Q8VCX2 364 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hkdc1Q91W97 915 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Trappc5Q9CQA1 188 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ovca2Q9D7E3 225 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Slc5a3Q9JKZ2 718 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Phf2Q9WTU0 1096 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tnrc18Q80WC3 2878 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Chd3B1AR17 2055 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Oas1eA0A0J9YV76 386 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mgat4eA6H684 439 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zc3h7aE9PWW6 970 aaKnown RBP6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Prdm15E9Q8T2 1174 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm1758F6VZZ1 202 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm14496K7N5U4 849 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Il1rnP25085 178 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gdf5P43027 495 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ndst2P52850 883 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Arf5P84084 180 aaKnown RBP6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mylk3Q3UIZ8 795 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Trcg1Q58Y74 825 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 CpQ61147 1061 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fcrl5Q68SN8 596 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Krt42Q6IFX2 452 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr1355Q7TQU9 310 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gpr139Q80UC8 345 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fam72aQ8BFZ8 149 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Adipor2Q8BQS5 386 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cmtr2Q8BWQ4 767 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dus1lQ8C2P3 475 aa6.89□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms