RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ACOX1Q15067 660 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 ANKRD20A4Q4UJ75 823 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 TMEM259Q4ZIN3 620 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 KIAA0895LQ68EN5 471 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 ZNF765Q7L2R6 523 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 HSD11B1LQ7Z5J1 315 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 C11orf74Q86VG3 221 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 IGDCC3Q8IVU1 814 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 PALM2Q8IXS6 379 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 ZBED8Q8IZ13 594 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 FRMD1Q8N878 549 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 CADM4Q8NFZ8 388 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 CDKN2AIPNLQ96HQ2 116 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 LENG8Q96PV6 779 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-213ENST00000642137 GPR174Q9BXC1 333 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 TREX1Q9NSU2 369 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 MBD1Q9UIS9 605 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-213ENST00000642137 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 MYLKQ15746 1914 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 KMT2EQ8IZD2 1858 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 CEP192Q8TEP8 1941 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 FAM47DPA6NHR8 397 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 METTL12A8MUP2 240 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 MAP3K13O43283 966 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 LATO43561 262 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 BUD23O43709 281 aaKnown RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 BANF1O75531 89 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 RECQL5O94762 991 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 PAK4O96013 591 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 POLBP06746 335 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 GSTA2P09210 222 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 SP9P0CG40 484 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 MYBL2P10244 700 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 TSHRP16473 764 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 BPIP17213 487 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 NMBRP28336 390 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 NUDT1P36639 197 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 SGCGQ13326 291 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 PTPRCAPQ14761 206 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ANGPT1Q15389 498 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ELF2Q15723 593 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ZNF284Q2VY69 593 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 SPDYCQ5MJ68 293 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 HP1BP3Q5SSJ5 553 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 SEL1L3Q68CR1 1132 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ESRP1Q6NXG1 681 aaKnown RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 Q6ZVL8 140 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 CYS1Q717R9 158 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 CCDC25Q86WR0 208 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ANKMY2Q8IV38 441 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 FAM160A2Q8N612 972 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 GPR26Q8NDV2 337 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 FBXO36Q8NEA4 188 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 OR13C4Q8NGS5 318 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 GAB3Q8WWW8 586 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 DTD2Q96FN9 168 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 SGSM3Q96HU1 749 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ZNF778Q96MU6 729 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 PLEKHG4BQ96PX9 1271 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ABCG8Q9H221 673 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 C6orf106Q9H6K1 298 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 BPIFA1Q9NP55 256 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ZSCAN32Q9NX65 697 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 ZC3H7BQ9UGR2 993 aaKnown RBP12.29□□□□□ -0.44
LINC00339-213ENST00000642137 APPL1Q9UKG1 709 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 CHMP2BQ9UQN3 213 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 INVSQ9Y283 1065 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 COQ6Q9Y2Z9 468 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 RPS6KL1Q9Y6S9 549 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 DOCK9Q9BZ29 2069 aa12.29□□□□□ -0.44
LINC00339-213ENST00000642137 PRR23AA6NEV1 266 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 RPP40O75818 363 aaKnown RBP12.28□□□□□ -0.44
LINC00339-213ENST00000642137 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 PAMP19021 973 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 SPAM1P38567 509 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 ETV3P41162 512 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 DCDC1P59894 354 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 PPP2CBP62714 309 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 PPP2CAP67775 309 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 TMPRSS15P98073 1019 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 XIAPP98170 497 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 DPTQ07507 201 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 FGL2Q14314 439 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
LINC00339-213ENST00000642137 FASTKD3Q14CZ7 662 aaKnown RBP12.28□□□□□ -0.44
LINC00339-213ENST00000642137 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 STEAP4Q687X5 459 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 CES3Q6UWW8 571 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 RFLNAQ6ZTI6 216 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 ZBTB44Q8NCP5 570 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 OR13J1Q8NGT2 312 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 CENPTQ96BT3 561 aa12.28□□□□□ -0.44
LINC00339-213ENST00000642137 DNAJC1Q96KC8 554 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms