RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 GOLGA8TH3BQL2 631 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 CD3EAPO15446 510 aaKnown RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 AHSGP02765 367 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 CTSLP07711 333 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 PYGBP11216 843 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 CREB1P16220 341 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 CTPS1P17812 591 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 CTHP32929 405 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 STC1P52823 247 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 SMAD2Q15796 467 aaKnown RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 SMAD1Q15797 465 aaKnown RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 CDKN3Q16667 212 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 FASTKD1Q53R41 847 aaKnown RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 C9orf64Q5T6V5 341 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 FSTL4Q6MZW2 842 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 CCDC91Q7Z6B0 441 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 RALGPS2Q86X27 583 aaPredicted RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 CBARPQ8N350 705 aaPredicted RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 DCLK2Q8N568 766 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 TTC8Q8TAM2 541 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 IQCGQ9H095 443 aaKnown RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 SNX15Q9NRS6 342 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.34■□□□□ 0.05
CLN6-219ENST00000637329 SUN2Q9UH99 717 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 APPL1Q9UKG1 709 aa15.34■□□□□ 0.05
CLN6-219ENST00000637329 NPIPB15A6NHN6 443 aaPredicted RBP15.33■□□□□ 0.04
CLN6-219ENST00000637329 FOXO6A8MYZ6 492 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 SPECC1L-ADORA2AF8WAN1 911 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 COPEO14579 308 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 TPP1O14773 563 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 BUD23O43709 281 aaKnown RBP15.33■□□□□ 0.04
CLN6-219ENST00000637329 GLRA3O75311 464 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 SLC4A1P02730 911 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 MPOP05164 745 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 GLULP15104 373 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 ITGB7P26010 798 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 VIPR1P32241 457 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 FOXN2P32314 431 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 CSRP3P50461 194 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 NEK3P51956 506 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 MPP1Q00013 466 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 PFKPQ01813 784 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 POU4F1Q01851 419 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 CTBP1Q13363 440 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 LEXMQ3ZCV2 418 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 ARSIQ5FYB1 569 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 NAIF1Q69YI7 327 aaPredicted RBP15.33■□□□□ 0.04
CLN6-219ENST00000637329 PTAR1Q7Z6K3 402 aaPredicted RBP15.33■□□□□ 0.04
CLN6-219ENST00000637329 RAVER1Q8IY67 606 aaKnown RBP15.33■□□□□ 0.04
CLN6-219ENST00000637329 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.33■□□□□ 0.04
CLN6-219ENST00000637329 CCDC134Q9H6E4 229 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 FBRSQ9HAH7 460 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 KCNK12Q9HB15 430 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 RAD18Q9NS91 495 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 PCMTD2Q9NV79 361 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 NFKBIL1Q9UBC1 381 aaPredicted RBP15.33■□□□□ 0.04
CLN6-219ENST00000637329 FAM50BQ9Y247 325 aa15.33■□□□□ 0.04
CLN6-219ENST00000637329 FAM95CA0A1B0GW59 222 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 C1QTNF3-AMACRE9PGA6 284 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 GSTA1P08263 222 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 SP100P23497 879 aaPredicted RBP15.32■□□□□ 0.04
CLN6-219ENST00000637329 GABRB3P28472 473 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 TYK2P29597 1187 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 MC4RP32245 332 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 CRHR1P34998 444 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 SPAM1P38567 509 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 IL12RB1P42701 662 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 TTPAP49638 278 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 TMPRSS15P98073 1019 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 GUCY1A3Q02108 690 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 CACNG1Q06432 222 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 ZKSCAN8Q15776 578 aaPredicted RBP15.32■□□□□ 0.04
CLN6-219ENST00000637329 INSCQ1MX18 579 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 PUS10Q3MIT2 529 aaKnown RBP15.32■□□□□ 0.04
CLN6-219ENST00000637329 TAF1BQ53T94 588 aaPredicted RBP15.32■□□□□ 0.04
CLN6-219ENST00000637329 EGFLAMQ63HQ2 1017 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 FAM45BPQ6NSW5 357 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 ERAP2Q6P179 960 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 CRTC1Q6UUV9 634 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 DPPA4Q7L190 304 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 FAM45AQ8TCE6 357 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 DENND1AQ8TEH3 1009 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 TSPAN17Q96FV3 270 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 PLEKHG4BQ96PX9 1271 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 SMIM14Q96QK8 99 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 FBXO6Q9NRD1 293 aaPredicted RBP15.32■□□□□ 0.04
CLN6-219ENST00000637329 MARCH4Q9P2E8 410 aaPredicted RBP15.32■□□□□ 0.04
CLN6-219ENST00000637329 B4GALT6Q9UBX8 382 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 FKBPLQ9UIM3 349 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 PPM1HQ9ULR3 514 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 ANKRD6Q9Y2G4 727 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 MTO1Q9Y2Z2 717 aaKnown RBP15.32■□□□□ 0.04
CLN6-219ENST00000637329 SLC30A1Q9Y6M5 507 aa15.32■□□□□ 0.04
CLN6-219ENST00000637329 C5orf42Q9H799 3197 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 OR51F1A6NGY5 319 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 C16orf96A6NNT2 1141 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 GOLGA8RI6L899 631 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 PSMD11O00231 422 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 CCL22O00626 93 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms