RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 MYO1CO00159 1063 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF197O14709 1029 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ALOX15BO15296 676 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TRAPPC3O43617 180 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CRCPO75575 148 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 HLA-DRAP01903 254 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CYP1A1P04798 512 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 INHBBP09529 407 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ETV5P41161 510 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CBX5P45973 191 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 HNRNPMP52272 730 aaKnown RBP eCLIP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CDH15P55291 814 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TSPAN5P62079 268 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CEBPZQ03701 1054 aaKnown RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TLE1Q04724 770 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PDZK1IP1Q13113 114 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 MAB21L1Q13394 359 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 RAB3GAP1Q15042 981 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ZXDCQ2QGD7 858 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PPP6R3Q5H9R7 873 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PPM1JQ5JR12 505 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 GCNT6Q5T4J0 391 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ARMC12Q5T9G4 340 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 MBLAC2Q68D91 279 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 C18orf63Q68DL7 685 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TMEM53Q6P2H8 277 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 NANOGNBQ7Z5D8 188 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF410Q86VK4 478 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ARHGAP12Q8IWW6 846 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CLYBLQ8N0X4 340 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ABRAQ8N0Z2 381 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 MMP21Q8N119 569 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 GALNT11Q8NCW6 608 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CCNYQ8ND76 341 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ROBO4Q8WZ75 1007 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 DPF1Q92782 380 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SAAL1Q96ER3 474 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PGAM5Q96HS1 289 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 MAP6Q96JE9 813 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TMEM68Q96MH6 324 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF560Q96MR9 790 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ADI1Q9BV57 179 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 C1QTNF3Q9BXJ4 246 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FAM192AQ9GZU8 254 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PRDM14Q9GZV8 571 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 RAD21L1Q9H4I0 556 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CLK4Q9HAZ1 481 aaKnown RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TRPC7Q9HCX4 862 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 HYPKQ9NX55 129 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ZSCAN32Q9NX65 697 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 GFOD1Q9NXC2 390 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PRR13Q9NZ81 148 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 MPP6Q9NZW5 540 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FBXL17Q9UF56 701 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 NEU2Q9Y3R4 380 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ADGRB2O60241 1585 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ACEP12821 1306 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ATP10DQ9P241 1426 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ADGRB3O60242 1522 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 LOC102723996A0A087X1L8 192 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 H3BM21 787 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 IGF2BP3O00425 579 aaKnown RBP eCLIP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SOX1O00570 391 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PRRG1O14668 218 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 DHHO43323 396 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CCNT1O60563 726 aaKnown RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TOM1L1O75674 476 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 RBBP9O75884 186 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SEC24DO94855 1032 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CAVIN2O95810 425 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TGM6O95932 706 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 GNAI2P04899 355 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FESP07332 822 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 OR8G3PP0DMU2 310 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SYN1P17600 705 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ADRA2CP18825 462 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 RRM2P31350 389 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 OTX2P32243 289 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 RGS19P49795 217 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 MNAT1P51948 309 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SUCLG1P53597 346 aaKnown RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ATP12AP54707 1039 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 EIF3BP55884 814 aaKnown RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ATP5IP56385 69 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CLDN8P56748 225 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PPIGQ13427 754 aaKnown RBP eCLIP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CBWD5Q5RIA9 395 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 PIP5KL1Q5T9C9 394 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SAMD5Q5TGI4 173 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TTC23LQ6PF05 361 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CRTC3Q6UUV7 619 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 DPP8Q6V1X1 898 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 LEKR1Q6ZMV7 388 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 OFCC1Q8IZS5 231 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 BATF2Q8N1L9 274 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 EHBP1Q8NDI1 1231 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SMARCC2Q8TAQ2 1214 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CAGE1Q8TC20 777 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 CCDC12Q8WUD4 166 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 HES6Q96HZ4 224 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms